Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NUP43Q8NFH3 AC137767.1-201ENST00000602918 1920 ntBASIC20.43■□□□□ 0.86
NUP43Q8NFH3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
NUP43Q8NFH3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.43■□□□□ 0.86
NUP43Q8NFH3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.43■□□□□ 0.86
NUP43Q8NFH3 CA15P2-201ENST00000611168 834 ntBASIC20.43■□□□□ 0.86
NUP43Q8NFH3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NUP43Q8NFH3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.43■□□□□ 0.86
NUP43Q8NFH3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NUP43Q8NFH3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUP43Q8NFH3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUP43Q8NFH3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
NUP43Q8NFH3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NUP43Q8NFH3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.43■□□□□ 0.86
NUP43Q8NFH3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUP43Q8NFH3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NUP43Q8NFH3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NUP43Q8NFH3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.42■□□□□ 0.86
NUP43Q8NFH3 SERBP1P1-201ENST00000396021 1160 ntBASIC20.42■□□□□ 0.86
NUP43Q8NFH3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.42■□□□□ 0.86
NUP43Q8NFH3 AL136116.3-201ENST00000402907 1138 ntBASIC20.42■□□□□ 0.86
NUP43Q8NFH3 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.42■□□□□ 0.86
NUP43Q8NFH3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.42■□□□□ 0.86
NUP43Q8NFH3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
NUP43Q8NFH3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.42■□□□□ 0.86
NUP43Q8NFH3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.42■□□□□ 0.86
NUP43Q8NFH3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUP43Q8NFH3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUP43Q8NFH3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUP43Q8NFH3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.42■□□□□ 0.86
NUP43Q8NFH3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NUP43Q8NFH3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUP43Q8NFH3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUP43Q8NFH3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
NUP43Q8NFH3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.41■□□□□ 0.86
NUP43Q8NFH3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
NUP43Q8NFH3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUP43Q8NFH3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
NUP43Q8NFH3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.41■□□□□ 0.86
NUP43Q8NFH3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUP43Q8NFH3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
NUP43Q8NFH3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUP43Q8NFH3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUP43Q8NFH3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.41■□□□□ 0.86
NUP43Q8NFH3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
NUP43Q8NFH3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
NUP43Q8NFH3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUP43Q8NFH3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NUP43Q8NFH3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
NUP43Q8NFH3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
NUP43Q8NFH3 AL138724.1-201ENST00000606771 1088 ntBASIC20.4■□□□□ 0.86
NUP43Q8NFH3 AL031602.1-201ENST00000633169 911 ntBASIC20.4■□□□□ 0.86
NUP43Q8NFH3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUP43Q8NFH3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUP43Q8NFH3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NUP43Q8NFH3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NUP43Q8NFH3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
NUP43Q8NFH3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.39■□□□□ 0.86
NUP43Q8NFH3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.39■□□□□ 0.86
NUP43Q8NFH3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NUP43Q8NFH3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
NUP43Q8NFH3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
NUP43Q8NFH3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
NUP43Q8NFH3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
NUP43Q8NFH3 OR2I1P-207ENST00000453522 948 ntBASIC20.39■□□□□ 0.85
NUP43Q8NFH3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.39■□□□□ 0.85
NUP43Q8NFH3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.39■□□□□ 0.85
NUP43Q8NFH3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUP43Q8NFH3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NUP43Q8NFH3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUP43Q8NFH3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NUP43Q8NFH3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
NUP43Q8NFH3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.39■□□□□ 0.85
NUP43Q8NFH3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUP43Q8NFH3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.38■□□□□ 0.85
NUP43Q8NFH3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.38■□□□□ 0.85
NUP43Q8NFH3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
NUP43Q8NFH3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUP43Q8NFH3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NUP43Q8NFH3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUP43Q8NFH3 LINC00565-201ENST00000562710 2331 ntBASIC20.38■□□□□ 0.85
NUP43Q8NFH3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUP43Q8NFH3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
NUP43Q8NFH3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
NUP43Q8NFH3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NUP43Q8NFH3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NUP43Q8NFH3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUP43Q8NFH3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUP43Q8NFH3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
NUP43Q8NFH3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.37■□□□□ 0.85
NUP43Q8NFH3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NUP43Q8NFH3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUP43Q8NFH3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUP43Q8NFH3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUP43Q8NFH3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.37■□□□□ 0.85
NUP43Q8NFH3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUP43Q8NFH3 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.37■□□□□ 0.85
NUP43Q8NFH3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUP43Q8NFH3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.37■□□□□ 0.85
NUP43Q8NFH3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms