Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ZNF248Q8NDW4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.86■□□□□ 0.93
ZNF248Q8NDW4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.86■□□□□ 0.93
ZNF248Q8NDW4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF248Q8NDW4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.86■□□□□ 0.93
ZNF248Q8NDW4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.86■□□□□ 0.93
ZNF248Q8NDW4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.86■□□□□ 0.93
ZNF248Q8NDW4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF248Q8NDW4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF248Q8NDW4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF248Q8NDW4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.85■□□□□ 0.93
ZNF248Q8NDW4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.85■□□□□ 0.93
ZNF248Q8NDW4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.85■□□□□ 0.93
ZNF248Q8NDW4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.85■□□□□ 0.93
ZNF248Q8NDW4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF248Q8NDW4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.85■□□□□ 0.93
ZNF248Q8NDW4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
ZNF248Q8NDW4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF248Q8NDW4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF248Q8NDW4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.85■□□□□ 0.93
ZNF248Q8NDW4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF248Q8NDW4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.84■□□□□ 0.93
ZNF248Q8NDW4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.84■□□□□ 0.93
ZNF248Q8NDW4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF248Q8NDW4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF248Q8NDW4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ZNF248Q8NDW4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.84■□□□□ 0.93
ZNF248Q8NDW4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF248Q8NDW4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
ZNF248Q8NDW4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.84■□□□□ 0.93
ZNF248Q8NDW4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF248Q8NDW4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF248Q8NDW4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.84■□□□□ 0.93
ZNF248Q8NDW4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.84■□□□□ 0.93
ZNF248Q8NDW4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF248Q8NDW4 BX005040.4-201ENST00000637145 1518 ntBASIC20.83■□□□□ 0.93
ZNF248Q8NDW4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF248Q8NDW4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF248Q8NDW4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
ZNF248Q8NDW4 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.83■□□□□ 0.93
ZNF248Q8NDW4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF248Q8NDW4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.83■□□□□ 0.93
ZNF248Q8NDW4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
ZNF248Q8NDW4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
ZNF248Q8NDW4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZNF248Q8NDW4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF248Q8NDW4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF248Q8NDW4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.82■□□□□ 0.92
ZNF248Q8NDW4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.82■□□□□ 0.92
ZNF248Q8NDW4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.82■□□□□ 0.92
ZNF248Q8NDW4 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.82■□□□□ 0.92
ZNF248Q8NDW4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.82■□□□□ 0.92
ZNF248Q8NDW4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF248Q8NDW4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF248Q8NDW4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF248Q8NDW4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF248Q8NDW4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.82■□□□□ 0.92
ZNF248Q8NDW4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF248Q8NDW4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF248Q8NDW4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF248Q8NDW4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF248Q8NDW4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF248Q8NDW4 TSPY20P-201ENST00000450910 630 ntBASIC20.81■□□□□ 0.92
ZNF248Q8NDW4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.81■□□□□ 0.92
ZNF248Q8NDW4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.81■□□□□ 0.92
ZNF248Q8NDW4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
ZNF248Q8NDW4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF248Q8NDW4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF248Q8NDW4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF248Q8NDW4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF248Q8NDW4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF248Q8NDW4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
ZNF248Q8NDW4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF248Q8NDW4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF248Q8NDW4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.8■□□□□ 0.92
ZNF248Q8NDW4 AC142086.2-201ENST00000569753 217 ntBASIC20.8■□□□□ 0.92
ZNF248Q8NDW4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF248Q8NDW4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF248Q8NDW4 LINC01529-204ENST00000636474 1715 ntBASIC20.8■□□□□ 0.92
ZNF248Q8NDW4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ZNF248Q8NDW4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF248Q8NDW4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF248Q8NDW4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF248Q8NDW4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF248Q8NDW4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF248Q8NDW4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.79■□□□□ 0.92
ZNF248Q8NDW4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.79■□□□□ 0.92
ZNF248Q8NDW4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF248Q8NDW4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF248Q8NDW4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF248Q8NDW4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
ZNF248Q8NDW4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF248Q8NDW4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF248Q8NDW4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ZNF248Q8NDW4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF248Q8NDW4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ZNF248Q8NDW4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF248Q8NDW4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF248Q8NDW4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF248Q8NDW4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms