Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PAF1Q8N7H5 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PAF1Q8N7H5 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.31■■□□□ 1.16
PAF1Q8N7H5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.31■■□□□ 1.16
PAF1Q8N7H5 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PAF1Q8N7H5 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.31■■□□□ 1.16
PAF1Q8N7H5 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PAF1Q8N7H5 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
PAF1Q8N7H5 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.3■■□□□ 1.16
PAF1Q8N7H5 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
PAF1Q8N7H5 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.3■■□□□ 1.16
PAF1Q8N7H5 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PAF1Q8N7H5 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.3■■□□□ 1.16
PAF1Q8N7H5 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.3■■□□□ 1.16
PAF1Q8N7H5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.3■■□□□ 1.16
PAF1Q8N7H5 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PAF1Q8N7H5 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PAF1Q8N7H5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.3■■□□□ 1.16
PAF1Q8N7H5 DUSP8P5-201ENST00000422884 1815 ntBASIC22.29■■□□□ 1.16
PAF1Q8N7H5 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PAF1Q8N7H5 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PAF1Q8N7H5 AC027682.1-201ENST00000562846 899 ntBASIC22.29■■□□□ 1.16
PAF1Q8N7H5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.29■■□□□ 1.16
PAF1Q8N7H5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PAF1Q8N7H5 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
PAF1Q8N7H5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.29■■□□□ 1.16
PAF1Q8N7H5 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
PAF1Q8N7H5 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PAF1Q8N7H5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PAF1Q8N7H5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PAF1Q8N7H5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PAF1Q8N7H5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
PAF1Q8N7H5 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.28■■□□□ 1.16
PAF1Q8N7H5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PAF1Q8N7H5 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PAF1Q8N7H5 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
PAF1Q8N7H5 AC019069.1-201ENST00000610008 1333 ntBASIC22.28■■□□□ 1.16
PAF1Q8N7H5 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PAF1Q8N7H5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
PAF1Q8N7H5 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.28■■□□□ 1.16
PAF1Q8N7H5 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.28■■□□□ 1.16
PAF1Q8N7H5 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.27■■□□□ 1.16
PAF1Q8N7H5 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PAF1Q8N7H5 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
PAF1Q8N7H5 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PAF1Q8N7H5 AC099791.1-201ENST00000416440 715 ntBASIC22.27■■□□□ 1.16
PAF1Q8N7H5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.27■■□□□ 1.16
PAF1Q8N7H5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.27■■□□□ 1.16
PAF1Q8N7H5 AC233992.3-201ENST00000607491 485 ntBASIC22.27■■□□□ 1.16
PAF1Q8N7H5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PAF1Q8N7H5 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.16
PAF1Q8N7H5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
PAF1Q8N7H5 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
PAF1Q8N7H5 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PAF1Q8N7H5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PAF1Q8N7H5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PAF1Q8N7H5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PAF1Q8N7H5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.26■■□□□ 1.15
PAF1Q8N7H5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PAF1Q8N7H5 DUSP8P3-201ENST00000399571 1760 ntBASIC22.26■■□□□ 1.15
PAF1Q8N7H5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PAF1Q8N7H5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PAF1Q8N7H5 BX842568.3-201ENST00000418104 571 ntBASIC22.26■■□□□ 1.15
PAF1Q8N7H5 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
PAF1Q8N7H5 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.26■■□□□ 1.15
PAF1Q8N7H5 SLC47A1P1-202ENST00000449666 945 ntBASIC22.26■■□□□ 1.15
PAF1Q8N7H5 AP001330.3-201ENST00000520123 633 ntBASIC22.26■■□□□ 1.15
PAF1Q8N7H5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.26■■□□□ 1.15
PAF1Q8N7H5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC22.26■■□□□ 1.15
PAF1Q8N7H5 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
PAF1Q8N7H5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
PAF1Q8N7H5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PAF1Q8N7H5 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
PAF1Q8N7H5 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PAF1Q8N7H5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.25■■□□□ 1.15
PAF1Q8N7H5 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PAF1Q8N7H5 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
PAF1Q8N7H5 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.25■■□□□ 1.15
PAF1Q8N7H5 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PAF1Q8N7H5 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.25■■□□□ 1.15
PAF1Q8N7H5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
PAF1Q8N7H5 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PAF1Q8N7H5 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PAF1Q8N7H5 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PAF1Q8N7H5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
PAF1Q8N7H5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
PAF1Q8N7H5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
PAF1Q8N7H5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
PAF1Q8N7H5 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PAF1Q8N7H5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PAF1Q8N7H5 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PAF1Q8N7H5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PAF1Q8N7H5 AC091305.1-201ENST00000479476 895 ntBASIC22.24■■□□□ 1.15
PAF1Q8N7H5 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PAF1Q8N7H5 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.24■■□□□ 1.15
PAF1Q8N7H5 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PAF1Q8N7H5 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PAF1Q8N7H5 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PAF1Q8N7H5 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.24■■□□□ 1.15
PAF1Q8N7H5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms