Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.29■■□□□ 1.16
SYNPOQ8N3V7 SMUG1P1-201ENST00000590640 811 ntBASIC22.29■■□□□ 1.16
SYNPOQ8N3V7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SYNPOQ8N3V7 AL109923.1-201ENST00000618799 583 ntBASIC22.29■■□□□ 1.16
SYNPOQ8N3V7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.29■■□□□ 1.16
SYNPOQ8N3V7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.29■■□□□ 1.16
SYNPOQ8N3V7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.29■■□□□ 1.16
SYNPOQ8N3V7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SYNPOQ8N3V7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
SYNPOQ8N3V7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SYNPOQ8N3V7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SYNPOQ8N3V7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYNPOQ8N3V7 LINC01124-201ENST00000409786 2117 ntBASIC22.28■■□□□ 1.16
SYNPOQ8N3V7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYNPOQ8N3V7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
SYNPOQ8N3V7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
SYNPOQ8N3V7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SYNPOQ8N3V7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
SYNPOQ8N3V7 CROCCP5-201ENST00000436658 830 ntBASIC22.28■■□□□ 1.16
SYNPOQ8N3V7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.28■■□□□ 1.16
SYNPOQ8N3V7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SYNPOQ8N3V7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.28■■□□□ 1.16
SYNPOQ8N3V7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SYNPOQ8N3V7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYNPOQ8N3V7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYNPOQ8N3V7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.28■■□□□ 1.16
SYNPOQ8N3V7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYNPOQ8N3V7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.28■■□□□ 1.16
SYNPOQ8N3V7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYNPOQ8N3V7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
SYNPOQ8N3V7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
SYNPOQ8N3V7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SYNPOQ8N3V7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SYNPOQ8N3V7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
SYNPOQ8N3V7 AC011767.1-201ENST00000617410 1153 ntBASIC22.27■■□□□ 1.16
SYNPOQ8N3V7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
SYNPOQ8N3V7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.27■■□□□ 1.16
SYNPOQ8N3V7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
SYNPOQ8N3V7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.15
SYNPOQ8N3V7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SYNPOQ8N3V7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.26■■□□□ 1.15
SYNPOQ8N3V7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SYNPOQ8N3V7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
SYNPOQ8N3V7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SYNPOQ8N3V7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
SYNPOQ8N3V7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SYNPOQ8N3V7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.26■■□□□ 1.15
SYNPOQ8N3V7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SYNPOQ8N3V7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.26■■□□□ 1.15
SYNPOQ8N3V7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SYNPOQ8N3V7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SYNPOQ8N3V7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SYNPOQ8N3V7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
SYNPOQ8N3V7 AC004687.1-201ENST00000579003 1625 ntBASIC22.25■■□□□ 1.15
SYNPOQ8N3V7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SYNPOQ8N3V7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SYNPOQ8N3V7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SYNPOQ8N3V7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.25■■□□□ 1.15
SYNPOQ8N3V7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SYNPOQ8N3V7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SYNPOQ8N3V7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.25■■□□□ 1.15
SYNPOQ8N3V7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.25■■□□□ 1.15
SYNPOQ8N3V7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SYNPOQ8N3V7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SYNPOQ8N3V7 AC079140.4-201ENST00000507448 529 ntBASIC22.24■■□□□ 1.15
SYNPOQ8N3V7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.24■■□□□ 1.15
SYNPOQ8N3V7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.24■■□□□ 1.15
SYNPOQ8N3V7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SYNPOQ8N3V7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
SYNPOQ8N3V7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.24■■□□□ 1.15
SYNPOQ8N3V7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SYNPOQ8N3V7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SYNPOQ8N3V7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SYNPOQ8N3V7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SYNPOQ8N3V7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.24■■□□□ 1.15
SYNPOQ8N3V7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SYNPOQ8N3V7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SYNPOQ8N3V7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SYNPOQ8N3V7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SYNPOQ8N3V7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.23■■□□□ 1.15
SYNPOQ8N3V7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SYNPOQ8N3V7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SYNPOQ8N3V7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SYNPOQ8N3V7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.23■■□□□ 1.15
SYNPOQ8N3V7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
SYNPOQ8N3V7 ESRRAP2-201ENST00000418437 1549 ntBASIC22.22■■□□□ 1.15
SYNPOQ8N3V7 OXCT2P1-201ENST00000447263 1535 ntBASIC22.22■■□□□ 1.15
SYNPOQ8N3V7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.22■■□□□ 1.15
SYNPOQ8N3V7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SYNPOQ8N3V7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.22■■□□□ 1.15
SYNPOQ8N3V7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SYNPOQ8N3V7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SYNPOQ8N3V7 GPX1P1-201ENST00000388829 606 ntBASIC22.22■■□□□ 1.15
SYNPOQ8N3V7 AL355802.2-201ENST00000402069 882 ntBASIC22.22■■□□□ 1.15
SYNPOQ8N3V7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.22■■□□□ 1.15
SYNPOQ8N3V7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.22■■□□□ 1.15
SYNPOQ8N3V7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SYNPOQ8N3V7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SYNPOQ8N3V7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
SYNPOQ8N3V7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms