Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.63■■□□□ 1.37
VPS52Q8N1B4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.63■■□□□ 1.37
VPS52Q8N1B4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
VPS52Q8N1B4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
VPS52Q8N1B4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS52Q8N1B4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS52Q8N1B4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.62■■□□□ 1.37
VPS52Q8N1B4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS52Q8N1B4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
VPS52Q8N1B4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.62■■□□□ 1.37
VPS52Q8N1B4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.62■■□□□ 1.37
VPS52Q8N1B4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.62■■□□□ 1.37
VPS52Q8N1B4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.62■■□□□ 1.37
VPS52Q8N1B4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
VPS52Q8N1B4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.62■■□□□ 1.37
VPS52Q8N1B4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS52Q8N1B4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
VPS52Q8N1B4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
VPS52Q8N1B4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.61■■□□□ 1.37
VPS52Q8N1B4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.61■■□□□ 1.37
VPS52Q8N1B4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.61■■□□□ 1.37
VPS52Q8N1B4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS52Q8N1B4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS52Q8N1B4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
VPS52Q8N1B4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.6■■□□□ 1.37
VPS52Q8N1B4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
VPS52Q8N1B4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
VPS52Q8N1B4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
VPS52Q8N1B4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.6■■□□□ 1.37
VPS52Q8N1B4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.6■■□□□ 1.37
VPS52Q8N1B4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.6■■□□□ 1.37
VPS52Q8N1B4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
VPS52Q8N1B4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
VPS52Q8N1B4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.6■■□□□ 1.37
VPS52Q8N1B4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
VPS52Q8N1B4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
VPS52Q8N1B4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
VPS52Q8N1B4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
VPS52Q8N1B4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
VPS52Q8N1B4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.59■■□□□ 1.37
VPS52Q8N1B4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.59■■□□□ 1.37
VPS52Q8N1B4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
VPS52Q8N1B4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
VPS52Q8N1B4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
VPS52Q8N1B4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
VPS52Q8N1B4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
VPS52Q8N1B4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
VPS52Q8N1B4 ID1-201ENST00000376105 1233 ntBASIC23.58■■□□□ 1.37
VPS52Q8N1B4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.58■■□□□ 1.37
VPS52Q8N1B4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
VPS52Q8N1B4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.36
VPS52Q8N1B4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.36
VPS52Q8N1B4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
VPS52Q8N1B4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
VPS52Q8N1B4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
VPS52Q8N1B4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
VPS52Q8N1B4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
VPS52Q8N1B4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
VPS52Q8N1B4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
VPS52Q8N1B4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.57■■□□□ 1.36
VPS52Q8N1B4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.57■■□□□ 1.36
VPS52Q8N1B4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.57■■□□□ 1.36
VPS52Q8N1B4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
VPS52Q8N1B4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.57■■□□□ 1.36
VPS52Q8N1B4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.57■■□□□ 1.36
VPS52Q8N1B4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.57■■□□□ 1.36
VPS52Q8N1B4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
VPS52Q8N1B4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.57■■□□□ 1.36
VPS52Q8N1B4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.56■■□□□ 1.36
VPS52Q8N1B4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
VPS52Q8N1B4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
VPS52Q8N1B4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.56■■□□□ 1.36
VPS52Q8N1B4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.56■■□□□ 1.36
VPS52Q8N1B4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.56■■□□□ 1.36
VPS52Q8N1B4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.56■■□□□ 1.36
VPS52Q8N1B4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
VPS52Q8N1B4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
VPS52Q8N1B4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
VPS52Q8N1B4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
VPS52Q8N1B4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
VPS52Q8N1B4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
VPS52Q8N1B4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
VPS52Q8N1B4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.55■■□□□ 1.36
VPS52Q8N1B4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.55■■□□□ 1.36
VPS52Q8N1B4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
VPS52Q8N1B4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
VPS52Q8N1B4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
VPS52Q8N1B4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
VPS52Q8N1B4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.55■■□□□ 1.36
VPS52Q8N1B4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.55■■□□□ 1.36
VPS52Q8N1B4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
VPS52Q8N1B4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
VPS52Q8N1B4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
VPS52Q8N1B4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VPS52Q8N1B4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VPS52Q8N1B4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.54■■□□□ 1.36
VPS52Q8N1B4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
VPS52Q8N1B4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VPS52Q8N1B4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
VPS52Q8N1B4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 214.5 ms