Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.85
ABCA6Q8N139 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC32.88■■■□□ 2.85
ABCA6Q8N139 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC32.88■■■□□ 2.85
ABCA6Q8N139 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC32.88■■■□□ 2.85
ABCA6Q8N139 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC32.88■■■□□ 2.85
ABCA6Q8N139 BRI3-207ENST00000539286 699 ntTSL 2 BASIC32.88■■■□□ 2.85
ABCA6Q8N139 TBCB-214ENST00000629269 413 ntTSL 5 BASIC32.88■■■□□ 2.85
ABCA6Q8N139 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC32.88■■■□□ 2.85
ABCA6Q8N139 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC32.87■■■□□ 2.85
ABCA6Q8N139 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC32.87■■■□□ 2.85
ABCA6Q8N139 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC32.87■■■□□ 2.85
ABCA6Q8N139 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
ABCA6Q8N139 AC073210.2-201ENST00000430369 194 ntBASIC32.87■■■□□ 2.85
ABCA6Q8N139 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
ABCA6Q8N139 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
ABCA6Q8N139 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
ABCA6Q8N139 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC32.86■■■□□ 2.85
ABCA6Q8N139 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
ABCA6Q8N139 APTR-203ENST00000430801 583 ntTSL 5 BASIC32.86■■■□□ 2.85
ABCA6Q8N139 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC32.86■■■□□ 2.85
ABCA6Q8N139 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC32.86■■■□□ 2.85
ABCA6Q8N139 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC32.86■■■□□ 2.85
ABCA6Q8N139 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
ABCA6Q8N139 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
ABCA6Q8N139 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
ABCA6Q8N139 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
ABCA6Q8N139 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC32.85■■■□□ 2.85
ABCA6Q8N139 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC32.85■■■□□ 2.85
ABCA6Q8N139 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
ABCA6Q8N139 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC32.85■■■□□ 2.85
ABCA6Q8N139 PFKL-212ENST00000628044 129 ntTSL 3 BASIC32.85■■■□□ 2.85
ABCA6Q8N139 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC32.85■■■□□ 2.85
ABCA6Q8N139 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC32.85■■■□□ 2.85
ABCA6Q8N139 AC022211.4-201ENST00000625094 2161 ntBASIC32.84■■■□□ 2.85
ABCA6Q8N139 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC32.84■■■□□ 2.85
ABCA6Q8N139 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC32.84■■■□□ 2.85
ABCA6Q8N139 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC32.84■■■□□ 2.85
ABCA6Q8N139 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
ABCA6Q8N139 ASL-203ENST00000380839 1765 ntTSL 5 BASIC32.84■■■□□ 2.85
ABCA6Q8N139 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
ABCA6Q8N139 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
ABCA6Q8N139 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC32.84■■■□□ 2.85
ABCA6Q8N139 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
ABCA6Q8N139 ITM2C-210ENST00000620962 501 ntBASIC32.83■■■□□ 2.85
ABCA6Q8N139 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC32.82■■■□□ 2.85
ABCA6Q8N139 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC32.82■■■□□ 2.85
ABCA6Q8N139 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC32.82■■■□□ 2.84
ABCA6Q8N139 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
ABCA6Q8N139 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
ABCA6Q8N139 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
ABCA6Q8N139 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
ABCA6Q8N139 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
ABCA6Q8N139 POU5F1P3-201ENST00000428824 1078 ntBASIC32.81■■■□□ 2.84
ABCA6Q8N139 AC098590.1-201ENST00000468126 897 ntBASIC32.81■■■□□ 2.84
ABCA6Q8N139 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC32.81■■■□□ 2.84
ABCA6Q8N139 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
ABCA6Q8N139 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
ABCA6Q8N139 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC32.81■■■□□ 2.84
ABCA6Q8N139 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
ABCA6Q8N139 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC32.8■■■□□ 2.84
ABCA6Q8N139 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
ABCA6Q8N139 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC32.8■■■□□ 2.84
ABCA6Q8N139 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
ABCA6Q8N139 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
ABCA6Q8N139 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
ABCA6Q8N139 FAM201B-201ENST00000458407 597 ntBASIC32.8■■■□□ 2.84
ABCA6Q8N139 AF201337.1-201ENST00000520239 748 ntBASIC32.8■■■□□ 2.84
ABCA6Q8N139 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC32.8■■■□□ 2.84
ABCA6Q8N139 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC32.8■■■□□ 2.84
ABCA6Q8N139 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC32.79■■■□□ 2.84
ABCA6Q8N139 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
ABCA6Q8N139 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
ABCA6Q8N139 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
ABCA6Q8N139 CYP2T1P-201ENST00000432607 1285 ntBASIC32.79■■■□□ 2.84
ABCA6Q8N139 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC32.79■■■□□ 2.84
ABCA6Q8N139 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC32.79■■■□□ 2.84
ABCA6Q8N139 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
ABCA6Q8N139 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC32.79■■■□□ 2.84
ABCA6Q8N139 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC32.78■■■□□ 2.84
ABCA6Q8N139 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC32.78■■■□□ 2.84
ABCA6Q8N139 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
ABCA6Q8N139 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC32.78■■■□□ 2.84
ABCA6Q8N139 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
ABCA6Q8N139 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC32.78■■■□□ 2.84
ABCA6Q8N139 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
ABCA6Q8N139 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
ABCA6Q8N139 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
ABCA6Q8N139 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC32.77■■■□□ 2.84
ABCA6Q8N139 AC133552.2-202ENST00000575694 574 ntBASIC32.77■■■□□ 2.84
ABCA6Q8N139 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC32.77■■■□□ 2.84
ABCA6Q8N139 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
ABCA6Q8N139 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
ABCA6Q8N139 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC32.77■■■□□ 2.84
ABCA6Q8N139 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC32.76■■■□□ 2.84
ABCA6Q8N139 RPS2P52-201ENST00000469610 820 ntBASIC32.76■■■□□ 2.83
ABCA6Q8N139 MARS-234ENST00000630571 216 ntTSL 5 BASIC32.76■■■□□ 2.83
ABCA6Q8N139 MARS-235ENST00000630803 183 ntTSL 3 BASIC32.76■■■□□ 2.83
ABCA6Q8N139 OXCT2P1-201ENST00000447263 1535 ntBASIC32.75■■■□□ 2.83
ABCA6Q8N139 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
ABCA6Q8N139 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms