Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00346Q8IVM7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.3■□□□□ 0.68
LINC00346Q8IVM7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.3■□□□□ 0.68
LINC00346Q8IVM7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00346Q8IVM7 AC241377.3-202ENST00000626088 1088 ntBASIC19.3■□□□□ 0.68
LINC00346Q8IVM7 AC241585.3-202ENST00000628937 1088 ntBASIC19.3■□□□□ 0.68
LINC00346Q8IVM7 AC245100.8-202ENST00000629247 1058 ntBASIC19.3■□□□□ 0.68
LINC00346Q8IVM7 CLDN5-201ENST00000403084 2357 ntBASIC19.3■□□□□ 0.68
LINC00346Q8IVM7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LINC00346Q8IVM7 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.3■□□□□ 0.68
LINC00346Q8IVM7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.3■□□□□ 0.68
LINC00346Q8IVM7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00346Q8IVM7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.3■□□□□ 0.68
LINC00346Q8IVM7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00346Q8IVM7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.3■□□□□ 0.68
LINC00346Q8IVM7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.3■□□□□ 0.68
LINC00346Q8IVM7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC00346Q8IVM7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC00346Q8IVM7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC00346Q8IVM7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC00346Q8IVM7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC00346Q8IVM7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC00346Q8IVM7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
LINC00346Q8IVM7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LINC00346Q8IVM7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.29■□□□□ 0.68
LINC00346Q8IVM7 AC099791.2-201ENST00000605725 427 ntBASIC19.29■□□□□ 0.68
LINC00346Q8IVM7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.29■□□□□ 0.68
LINC00346Q8IVM7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.29■□□□□ 0.68
LINC00346Q8IVM7 C11orf96-202ENST00000528572 1834 ntBASIC19.29■□□□□ 0.68
LINC00346Q8IVM7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LINC00346Q8IVM7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LINC00346Q8IVM7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC00346Q8IVM7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LINC00346Q8IVM7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.28■□□□□ 0.68
LINC00346Q8IVM7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LINC00346Q8IVM7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LINC00346Q8IVM7 AC137767.1-201ENST00000602918 1920 ntBASIC19.28■□□□□ 0.68
LINC00346Q8IVM7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC00346Q8IVM7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.28■□□□□ 0.68
LINC00346Q8IVM7 AL356441.2-201ENST00000443009 864 ntBASIC19.28■□□□□ 0.68
LINC00346Q8IVM7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.28■□□□□ 0.68
LINC00346Q8IVM7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LINC00346Q8IVM7 pRNA.6-201ENST00000610482 90 ntBASIC19.28■□□□□ 0.68
LINC00346Q8IVM7 pRNA.5-201ENST00000612139 90 ntBASIC19.28■□□□□ 0.68
LINC00346Q8IVM7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.28■□□□□ 0.68
LINC00346Q8IVM7 pRNA.11-201ENST00000618423 90 ntBASIC19.28■□□□□ 0.68
LINC00346Q8IVM7 pRNA.13-201ENST00000619112 90 ntBASIC19.28■□□□□ 0.68
LINC00346Q8IVM7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC00346Q8IVM7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC00346Q8IVM7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LINC00346Q8IVM7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINC00346Q8IVM7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.27■□□□□ 0.68
LINC00346Q8IVM7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINC00346Q8IVM7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.27■□□□□ 0.68
LINC00346Q8IVM7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.27■□□□□ 0.68
LINC00346Q8IVM7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
LINC00346Q8IVM7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINC00346Q8IVM7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LINC00346Q8IVM7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.27■□□□□ 0.68
LINC00346Q8IVM7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.27■□□□□ 0.68
LINC00346Q8IVM7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LINC00346Q8IVM7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LINC00346Q8IVM7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
LINC00346Q8IVM7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LINC00346Q8IVM7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC00346Q8IVM7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC00346Q8IVM7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.26■□□□□ 0.67
LINC00346Q8IVM7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.26■□□□□ 0.67
LINC00346Q8IVM7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.26■□□□□ 0.67
LINC00346Q8IVM7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.26■□□□□ 0.67
LINC00346Q8IVM7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.26■□□□□ 0.67
LINC00346Q8IVM7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
LINC00346Q8IVM7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.26■□□□□ 0.67
LINC00346Q8IVM7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC00346Q8IVM7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC00346Q8IVM7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LINC00346Q8IVM7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC00346Q8IVM7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
LINC00346Q8IVM7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
LINC00346Q8IVM7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00346Q8IVM7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00346Q8IVM7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00346Q8IVM7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00346Q8IVM7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00346Q8IVM7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LINC00346Q8IVM7 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.25■□□□□ 0.67
LINC00346Q8IVM7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00346Q8IVM7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00346Q8IVM7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00346Q8IVM7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00346Q8IVM7 AC133637.1-201ENST00000624115 1537 ntBASIC19.25■□□□□ 0.67
LINC00346Q8IVM7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC00346Q8IVM7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC00346Q8IVM7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC00346Q8IVM7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.24■□□□□ 0.67
LINC00346Q8IVM7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.24■□□□□ 0.67
LINC00346Q8IVM7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LINC00346Q8IVM7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.24■□□□□ 0.67
LINC00346Q8IVM7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC00346Q8IVM7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms