Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC190Q86UF4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC190Q86UF4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC190Q86UF4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC190Q86UF4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC190Q86UF4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC190Q86UF4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC190Q86UF4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC190Q86UF4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC190Q86UF4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC190Q86UF4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC190Q86UF4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC190Q86UF4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC190Q86UF4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC190Q86UF4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC190Q86UF4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC190Q86UF4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC190Q86UF4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CCDC190Q86UF4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC190Q86UF4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC190Q86UF4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC190Q86UF4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CCDC190Q86UF4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CCDC190Q86UF4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC190Q86UF4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC190Q86UF4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CCDC190Q86UF4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC190Q86UF4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC190Q86UF4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC190Q86UF4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.02■□□□□ 0.63
CCDC190Q86UF4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.63
CCDC190Q86UF4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC190Q86UF4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.02■□□□□ 0.63
CCDC190Q86UF4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CCDC190Q86UF4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC190Q86UF4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
CCDC190Q86UF4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC190Q86UF4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC190Q86UF4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC190Q86UF4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC190Q86UF4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC190Q86UF4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC190Q86UF4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC190Q86UF4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC190Q86UF4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CCDC190Q86UF4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC190Q86UF4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC190Q86UF4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC190Q86UF4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC190Q86UF4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC190Q86UF4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCDC190Q86UF4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC190Q86UF4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19■□□□□ 0.63
CCDC190Q86UF4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19■□□□□ 0.63
CCDC190Q86UF4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC190Q86UF4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CCDC190Q86UF4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19■□□□□ 0.63
CCDC190Q86UF4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC190Q86UF4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC190Q86UF4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC190Q86UF4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19■□□□□ 0.63
CCDC190Q86UF4 AC092296.2-201ENST00000589470 999 ntBASIC19■□□□□ 0.63
CCDC190Q86UF4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
CCDC190Q86UF4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCDC190Q86UF4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC190Q86UF4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC190Q86UF4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC190Q86UF4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC190Q86UF4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC190Q86UF4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC190Q86UF4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
CCDC190Q86UF4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC190Q86UF4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC190Q86UF4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC190Q86UF4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC190Q86UF4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC190Q86UF4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC190Q86UF4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC190Q86UF4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CCDC190Q86UF4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC190Q86UF4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC190Q86UF4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC190Q86UF4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC190Q86UF4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC190Q86UF4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC190Q86UF4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC190Q86UF4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC190Q86UF4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC190Q86UF4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC190Q86UF4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC190Q86UF4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC190Q86UF4 AC026202.3-201ENST00000600805 1127 ntBASIC18.98■□□□□ 0.63
CCDC190Q86UF4 RAP2CP1-202ENST00000605179 643 ntBASIC18.98■□□□□ 0.63
CCDC190Q86UF4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC190Q86UF4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC190Q86UF4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCDC190Q86UF4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCDC190Q86UF4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC190Q86UF4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC190Q86UF4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms