Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
ATG4DQ86TL0 SYT6-210ENST00000641643 1587 ntBASIC19.84■□□□□ 0.77
ATG4DQ86TL0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATG4DQ86TL0 OR2I1P-207ENST00000453522 948 ntBASIC19.84■□□□□ 0.77
ATG4DQ86TL0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.84■□□□□ 0.77
ATG4DQ86TL0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.84■□□□□ 0.77
ATG4DQ86TL0 AL138724.1-201ENST00000606771 1088 ntBASIC19.84■□□□□ 0.77
ATG4DQ86TL0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATG4DQ86TL0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ATG4DQ86TL0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATG4DQ86TL0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATG4DQ86TL0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATG4DQ86TL0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.84■□□□□ 0.77
ATG4DQ86TL0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
ATG4DQ86TL0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ATG4DQ86TL0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATG4DQ86TL0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ATG4DQ86TL0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATG4DQ86TL0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ATG4DQ86TL0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATG4DQ86TL0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATG4DQ86TL0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
ATG4DQ86TL0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.83■□□□□ 0.77
ATG4DQ86TL0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.83■□□□□ 0.77
ATG4DQ86TL0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.83■□□□□ 0.77
ATG4DQ86TL0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.83■□□□□ 0.77
ATG4DQ86TL0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATG4DQ86TL0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
ATG4DQ86TL0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ATG4DQ86TL0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATG4DQ86TL0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATG4DQ86TL0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.83■□□□□ 0.76
ATG4DQ86TL0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATG4DQ86TL0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ATG4DQ86TL0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATG4DQ86TL0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATG4DQ86TL0 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.82■□□□□ 0.76
ATG4DQ86TL0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.82■□□□□ 0.76
ATG4DQ86TL0 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.82■□□□□ 0.76
ATG4DQ86TL0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ATG4DQ86TL0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATG4DQ86TL0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.82■□□□□ 0.76
ATG4DQ86TL0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.82■□□□□ 0.76
ATG4DQ86TL0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ATG4DQ86TL0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.82■□□□□ 0.76
ATG4DQ86TL0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
ATG4DQ86TL0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
ATG4DQ86TL0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATG4DQ86TL0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATG4DQ86TL0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.81■□□□□ 0.76
ATG4DQ86TL0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ATG4DQ86TL0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATG4DQ86TL0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATG4DQ86TL0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATG4DQ86TL0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.81■□□□□ 0.76
ATG4DQ86TL0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATG4DQ86TL0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATG4DQ86TL0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.81■□□□□ 0.76
ATG4DQ86TL0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATG4DQ86TL0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATG4DQ86TL0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATG4DQ86TL0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATG4DQ86TL0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ATG4DQ86TL0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.8■□□□□ 0.76
ATG4DQ86TL0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATG4DQ86TL0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATG4DQ86TL0 UNC93B3-201ENST00000308076 687 ntBASIC19.8■□□□□ 0.76
ATG4DQ86TL0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ATG4DQ86TL0 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.8■□□□□ 0.76
ATG4DQ86TL0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATG4DQ86TL0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.8■□□□□ 0.76
ATG4DQ86TL0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.8■□□□□ 0.76
ATG4DQ86TL0 LINC00565-201ENST00000562710 2331 ntBASIC19.8■□□□□ 0.76
ATG4DQ86TL0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ATG4DQ86TL0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATG4DQ86TL0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.8■□□□□ 0.76
ATG4DQ86TL0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ATG4DQ86TL0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.79■□□□□ 0.76
ATG4DQ86TL0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.79■□□□□ 0.76
ATG4DQ86TL0 PBX2P1-201ENST00000493219 1291 ntBASIC19.79■□□□□ 0.76
ATG4DQ86TL0 AC005837.3-201ENST00000612163 286 ntBASIC19.79■□□□□ 0.76
ATG4DQ86TL0 AC011298.3-201ENST00000615796 283 ntBASIC19.79■□□□□ 0.76
ATG4DQ86TL0 AC136469.2-201ENST00000623944 1028 ntBASIC19.79■□□□□ 0.76
ATG4DQ86TL0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.79■□□□□ 0.76
ATG4DQ86TL0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.79■□□□□ 0.76
ATG4DQ86TL0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATG4DQ86TL0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATG4DQ86TL0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATG4DQ86TL0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.79■□□□□ 0.76
ATG4DQ86TL0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATG4DQ86TL0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATG4DQ86TL0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATG4DQ86TL0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
ATG4DQ86TL0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATG4DQ86TL0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATG4DQ86TL0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATG4DQ86TL0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.78■□□□□ 0.76
ATG4DQ86TL0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.78■□□□□ 0.76
ATG4DQ86TL0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATG4DQ86TL0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms