Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CROCCP2Q86T23 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CROCCP2Q86T23 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CROCCP2Q86T23 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CROCCP2Q86T23 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CROCCP2Q86T23 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
CROCCP2Q86T23 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CROCCP2Q86T23 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CROCCP2Q86T23 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CROCCP2Q86T23 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.13■■□□□ 1.13
CROCCP2Q86T23 AC009086.3-201ENST00000623486 1008 ntBASIC22.13■■□□□ 1.13
CROCCP2Q86T23 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CROCCP2Q86T23 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CROCCP2Q86T23 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CROCCP2Q86T23 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CROCCP2Q86T23 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CROCCP2Q86T23 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CROCCP2Q86T23 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CROCCP2Q86T23 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CROCCP2Q86T23 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CROCCP2Q86T23 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CROCCP2Q86T23 LINC01521-201ENST00000504184 1943 ntBASIC22.12■■□□□ 1.13
CROCCP2Q86T23 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CROCCP2Q86T23 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CROCCP2Q86T23 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CROCCP2Q86T23 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CROCCP2Q86T23 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.12■■□□□ 1.13
CROCCP2Q86T23 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CROCCP2Q86T23 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CROCCP2Q86T23 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
CROCCP2Q86T23 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CROCCP2Q86T23 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CROCCP2Q86T23 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CROCCP2Q86T23 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.12■■□□□ 1.13
CROCCP2Q86T23 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CROCCP2Q86T23 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CROCCP2Q86T23 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CROCCP2Q86T23 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CROCCP2Q86T23 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CROCCP2Q86T23 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CROCCP2Q86T23 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.11■■□□□ 1.13
CROCCP2Q86T23 CA15P2-201ENST00000611168 834 ntBASIC22.11■■□□□ 1.13
CROCCP2Q86T23 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CROCCP2Q86T23 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CROCCP2Q86T23 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CROCCP2Q86T23 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CROCCP2Q86T23 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CROCCP2Q86T23 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.11■■□□□ 1.13
CROCCP2Q86T23 Z98882.1-201ENST00000622160 2253 ntBASIC22.1■■□□□ 1.13
CROCCP2Q86T23 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CROCCP2Q86T23 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.1■■□□□ 1.13
CROCCP2Q86T23 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.1■■□□□ 1.13
CROCCP2Q86T23 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
CROCCP2Q86T23 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CROCCP2Q86T23 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CROCCP2Q86T23 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.1■■□□□ 1.13
CROCCP2Q86T23 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.1■■□□□ 1.13
CROCCP2Q86T23 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CROCCP2Q86T23 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.1■■□□□ 1.13
CROCCP2Q86T23 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CROCCP2Q86T23 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CROCCP2Q86T23 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CROCCP2Q86T23 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CROCCP2Q86T23 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.09■■□□□ 1.13
CROCCP2Q86T23 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CROCCP2Q86T23 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.09■■□□□ 1.13
CROCCP2Q86T23 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.09■■□□□ 1.13
CROCCP2Q86T23 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CROCCP2Q86T23 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CROCCP2Q86T23 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CROCCP2Q86T23 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CROCCP2Q86T23 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CROCCP2Q86T23 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
CROCCP2Q86T23 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CROCCP2Q86T23 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CROCCP2Q86T23 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CROCCP2Q86T23 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CROCCP2Q86T23 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.08■■□□□ 1.13
CROCCP2Q86T23 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.08■■□□□ 1.13
CROCCP2Q86T23 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CROCCP2Q86T23 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CROCCP2Q86T23 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.08■■□□□ 1.12
CROCCP2Q86T23 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CROCCP2Q86T23 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CROCCP2Q86T23 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
CROCCP2Q86T23 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
CROCCP2Q86T23 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CROCCP2Q86T23 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CROCCP2Q86T23 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.07■■□□□ 1.12
CROCCP2Q86T23 AC120024.1-201ENST00000562672 995 ntBASIC22.07■■□□□ 1.12
CROCCP2Q86T23 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.07■■□□□ 1.12
CROCCP2Q86T23 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CROCCP2Q86T23 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.07■■□□□ 1.12
CROCCP2Q86T23 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.07■■□□□ 1.12
CROCCP2Q86T23 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CROCCP2Q86T23 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.07■■□□□ 1.12
CROCCP2Q86T23 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CROCCP2Q86T23 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CROCCP2Q86T23 RNF126P1-201ENST00000567452 1320 ntBASIC22.06■■□□□ 1.12
CROCCP2Q86T23 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms