Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.21■■□□□ 1.31
LIMS2Q7Z4I7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.21■■□□□ 1.31
LIMS2Q7Z4I7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.21■■□□□ 1.31
LIMS2Q7Z4I7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.21■■□□□ 1.31
LIMS2Q7Z4I7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LIMS2Q7Z4I7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LIMS2Q7Z4I7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.21■■□□□ 1.31
LIMS2Q7Z4I7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.21■■□□□ 1.31
LIMS2Q7Z4I7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LIMS2Q7Z4I7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.21■■□□□ 1.31
LIMS2Q7Z4I7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.2■■□□□ 1.3
LIMS2Q7Z4I7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.2■■□□□ 1.3
LIMS2Q7Z4I7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LIMS2Q7Z4I7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LIMS2Q7Z4I7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
LIMS2Q7Z4I7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LIMS2Q7Z4I7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LIMS2Q7Z4I7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.2■■□□□ 1.3
LIMS2Q7Z4I7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LIMS2Q7Z4I7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.2■■□□□ 1.3
LIMS2Q7Z4I7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.2■■□□□ 1.3
LIMS2Q7Z4I7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.2■■□□□ 1.3
LIMS2Q7Z4I7 TPRG1LP1-201ENST00000598702 760 ntBASIC23.2■■□□□ 1.3
LIMS2Q7Z4I7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.2■■□□□ 1.3
LIMS2Q7Z4I7 AC137767.1-201ENST00000602918 1920 ntBASIC23.2■■□□□ 1.3
LIMS2Q7Z4I7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
LIMS2Q7Z4I7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
LIMS2Q7Z4I7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.19■■□□□ 1.3
LIMS2Q7Z4I7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
LIMS2Q7Z4I7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
LIMS2Q7Z4I7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
LIMS2Q7Z4I7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
LIMS2Q7Z4I7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
LIMS2Q7Z4I7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LIMS2Q7Z4I7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
LIMS2Q7Z4I7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LIMS2Q7Z4I7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.18■■□□□ 1.3
LIMS2Q7Z4I7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LIMS2Q7Z4I7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.18■■□□□ 1.3
LIMS2Q7Z4I7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.18■■□□□ 1.3
LIMS2Q7Z4I7 C9orf163-202ENST00000624034 2573 ntBASIC23.18■■□□□ 1.3
LIMS2Q7Z4I7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LIMS2Q7Z4I7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LIMS2Q7Z4I7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LIMS2Q7Z4I7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LIMS2Q7Z4I7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LIMS2Q7Z4I7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.17■■□□□ 1.3
LIMS2Q7Z4I7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
LIMS2Q7Z4I7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.17■■□□□ 1.3
LIMS2Q7Z4I7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LIMS2Q7Z4I7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.17■■□□□ 1.3
LIMS2Q7Z4I7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LIMS2Q7Z4I7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LIMS2Q7Z4I7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
LIMS2Q7Z4I7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LIMS2Q7Z4I7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LIMS2Q7Z4I7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LIMS2Q7Z4I7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
LIMS2Q7Z4I7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LIMS2Q7Z4I7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LIMS2Q7Z4I7 LINC00526-201ENST00000581067 1875 ntBASIC23.16■■□□□ 1.3
LIMS2Q7Z4I7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.16■■□□□ 1.3
LIMS2Q7Z4I7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LIMS2Q7Z4I7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LIMS2Q7Z4I7 ESRRAP2-201ENST00000418437 1549 ntBASIC23.16■■□□□ 1.3
LIMS2Q7Z4I7 BX005040.4-201ENST00000637145 1518 ntBASIC23.16■■□□□ 1.3
LIMS2Q7Z4I7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LIMS2Q7Z4I7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LIMS2Q7Z4I7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.16■■□□□ 1.3
LIMS2Q7Z4I7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
LIMS2Q7Z4I7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
LIMS2Q7Z4I7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LIMS2Q7Z4I7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LIMS2Q7Z4I7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LIMS2Q7Z4I7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LIMS2Q7Z4I7 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.15■■□□□ 1.3
LIMS2Q7Z4I7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LIMS2Q7Z4I7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LIMS2Q7Z4I7 TERF1P2-201ENST00000583350 1212 ntBASIC23.15■■□□□ 1.3
LIMS2Q7Z4I7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LIMS2Q7Z4I7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LIMS2Q7Z4I7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LIMS2Q7Z4I7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LIMS2Q7Z4I7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.15■■□□□ 1.3
LIMS2Q7Z4I7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LIMS2Q7Z4I7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
LIMS2Q7Z4I7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LIMS2Q7Z4I7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LIMS2Q7Z4I7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LIMS2Q7Z4I7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
LIMS2Q7Z4I7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.29
LIMS2Q7Z4I7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
LIMS2Q7Z4I7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.14■■□□□ 1.29
LIMS2Q7Z4I7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LIMS2Q7Z4I7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
LIMS2Q7Z4I7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.14■■□□□ 1.29
LIMS2Q7Z4I7 C1orf229-201ENST00000623686 2258 ntBASIC23.13■■□□□ 1.29
LIMS2Q7Z4I7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.13■■□□□ 1.29
LIMS2Q7Z4I7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LIMS2Q7Z4I7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms