Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF550Q7Z398 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ZNF550Q7Z398 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF550Q7Z398 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF550Q7Z398 AC006455.2-201ENST00000429931 906 ntBASIC20.07■□□□□ 0.8
ZNF550Q7Z398 AC005837.3-201ENST00000612163 286 ntBASIC20.07■□□□□ 0.8
ZNF550Q7Z398 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF550Q7Z398 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF550Q7Z398 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.07■□□□□ 0.8
ZNF550Q7Z398 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.07■□□□□ 0.8
ZNF550Q7Z398 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ZNF550Q7Z398 AC092053.2-201ENST00000640557 1818 ntBASIC20.06■□□□□ 0.8
ZNF550Q7Z398 PKD1P6-201ENST00000343738 4769 ntBASIC20.06■□□□□ 0.8
ZNF550Q7Z398 PBX2P1-201ENST00000493219 1291 ntBASIC20.06■□□□□ 0.8
ZNF550Q7Z398 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.06■□□□□ 0.8
ZNF550Q7Z398 AC139530.1-201ENST00000575312 1977 ntBASIC20.06■□□□□ 0.8
ZNF550Q7Z398 AC080038.3-201ENST00000623346 1952 ntBASIC20.06■□□□□ 0.8
ZNF550Q7Z398 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
ZNF550Q7Z398 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF550Q7Z398 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF550Q7Z398 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
ZNF550Q7Z398 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.05■□□□□ 0.8
ZNF550Q7Z398 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF550Q7Z398 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF550Q7Z398 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF550Q7Z398 UNC93B3-201ENST00000308076 687 ntBASIC20.05■□□□□ 0.8
ZNF550Q7Z398 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ZNF550Q7Z398 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
ZNF550Q7Z398 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ZNF550Q7Z398 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.05■□□□□ 0.8
ZNF550Q7Z398 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF550Q7Z398 CA15P2-201ENST00000611168 834 ntBASIC20.05■□□□□ 0.8
ZNF550Q7Z398 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.05■□□□□ 0.8
ZNF550Q7Z398 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF550Q7Z398 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF550Q7Z398 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF550Q7Z398 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF550Q7Z398 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNF550Q7Z398 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF550Q7Z398 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNF550Q7Z398 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF550Q7Z398 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF550Q7Z398 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF550Q7Z398 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.04■□□□□ 0.8
ZNF550Q7Z398 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ZNF550Q7Z398 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNF550Q7Z398 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF550Q7Z398 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
ZNF550Q7Z398 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF550Q7Z398 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNF550Q7Z398 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF550Q7Z398 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF550Q7Z398 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF550Q7Z398 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNF550Q7Z398 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF550Q7Z398 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF550Q7Z398 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNF550Q7Z398 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.03■□□□□ 0.8
ZNF550Q7Z398 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF550Q7Z398 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
ZNF550Q7Z398 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ZNF550Q7Z398 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNF550Q7Z398 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF550Q7Z398 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF550Q7Z398 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.02■□□□□ 0.8
ZNF550Q7Z398 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
ZNF550Q7Z398 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.02■□□□□ 0.8
ZNF550Q7Z398 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF550Q7Z398 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF550Q7Z398 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.02■□□□□ 0.8
ZNF550Q7Z398 MIR3181-201ENST00000578512 73 ntBASIC20.02■□□□□ 0.8
ZNF550Q7Z398 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.02■□□□□ 0.8
ZNF550Q7Z398 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF550Q7Z398 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.02■□□□□ 0.8
ZNF550Q7Z398 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.02■□□□□ 0.8
ZNF550Q7Z398 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.02■□□□□ 0.8
ZNF550Q7Z398 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
ZNF550Q7Z398 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ZNF550Q7Z398 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF550Q7Z398 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF550Q7Z398 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
ZNF550Q7Z398 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF550Q7Z398 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF550Q7Z398 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF550Q7Z398 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF550Q7Z398 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.01■□□□□ 0.79
ZNF550Q7Z398 DUX4L19-201ENST00000557448 1267 ntBASIC20.01■□□□□ 0.79
ZNF550Q7Z398 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF550Q7Z398 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.01■□□□□ 0.79
ZNF550Q7Z398 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
ZNF550Q7Z398 AL136162.1-201ENST00000607711 1078 ntBASIC20.01■□□□□ 0.79
ZNF550Q7Z398 AC106739.1-201ENST00000617035 715 ntBASIC20.01■□□□□ 0.79
ZNF550Q7Z398 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF550Q7Z398 AC137767.1-201ENST00000602918 1920 ntBASIC20.01■□□□□ 0.79
ZNF550Q7Z398 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ZNF550Q7Z398 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF550Q7Z398 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF550Q7Z398 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF550Q7Z398 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF550Q7Z398 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms