Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF44Q7L0R7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF44Q7L0R7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF44Q7L0R7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF44Q7L0R7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF44Q7L0R7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.9■□□□□ 0.94
RNF44Q7L0R7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF44Q7L0R7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
RNF44Q7L0R7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF44Q7L0R7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF44Q7L0R7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF44Q7L0R7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF44Q7L0R7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF44Q7L0R7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RNF44Q7L0R7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.89■□□□□ 0.94
RNF44Q7L0R7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.89■□□□□ 0.93
RNF44Q7L0R7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF44Q7L0R7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
RNF44Q7L0R7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF44Q7L0R7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.89■□□□□ 0.93
RNF44Q7L0R7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.89■□□□□ 0.93
RNF44Q7L0R7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.89■□□□□ 0.93
RNF44Q7L0R7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RNF44Q7L0R7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF44Q7L0R7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.89■□□□□ 0.93
RNF44Q7L0R7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF44Q7L0R7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF44Q7L0R7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF44Q7L0R7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RNF44Q7L0R7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF44Q7L0R7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RNF44Q7L0R7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF44Q7L0R7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF44Q7L0R7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.88■□□□□ 0.93
RNF44Q7L0R7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
RNF44Q7L0R7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF44Q7L0R7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RNF44Q7L0R7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF44Q7L0R7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF44Q7L0R7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF44Q7L0R7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF44Q7L0R7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.87■□□□□ 0.93
RNF44Q7L0R7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF44Q7L0R7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.87■□□□□ 0.93
RNF44Q7L0R7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RNF44Q7L0R7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RNF44Q7L0R7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF44Q7L0R7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
RNF44Q7L0R7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF44Q7L0R7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF44Q7L0R7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF44Q7L0R7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF44Q7L0R7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF44Q7L0R7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
RNF44Q7L0R7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF44Q7L0R7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF44Q7L0R7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF44Q7L0R7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF44Q7L0R7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF44Q7L0R7 OXCT2P1-201ENST00000447263 1535 ntBASIC20.86■□□□□ 0.93
RNF44Q7L0R7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
RNF44Q7L0R7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RNF44Q7L0R7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF44Q7L0R7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF44Q7L0R7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF44Q7L0R7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF44Q7L0R7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
RNF44Q7L0R7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF44Q7L0R7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF44Q7L0R7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.85■□□□□ 0.93
RNF44Q7L0R7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF44Q7L0R7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF44Q7L0R7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF44Q7L0R7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
RNF44Q7L0R7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF44Q7L0R7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF44Q7L0R7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RNF44Q7L0R7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.84■□□□□ 0.93
RNF44Q7L0R7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RNF44Q7L0R7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF44Q7L0R7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF44Q7L0R7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF44Q7L0R7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF44Q7L0R7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF44Q7L0R7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF44Q7L0R7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF44Q7L0R7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF44Q7L0R7 AC012414.1-201ENST00000556676 535 ntBASIC20.84■□□□□ 0.93
RNF44Q7L0R7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.84■□□□□ 0.93
RNF44Q7L0R7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF44Q7L0R7 AC087742.1-201ENST00000575880 1738 ntBASIC20.84■□□□□ 0.93
RNF44Q7L0R7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF44Q7L0R7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.83■□□□□ 0.93
RNF44Q7L0R7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF44Q7L0R7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RNF44Q7L0R7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.83■□□□□ 0.93
RNF44Q7L0R7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.83■□□□□ 0.93
RNF44Q7L0R7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.83■□□□□ 0.93
RNF44Q7L0R7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.83■□□□□ 0.93
RNF44Q7L0R7 AL358852.1-201ENST00000623174 1268 ntBASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms