Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 METAP2-201ENST00000261220 1836 ntTSL 2 BASIC12.2□□□□□ -0.469e-8■■■■□ 22.2
LARP4Q71RC2 METAP2-209ENST00000550777 1779 ntTSL 5 BASIC12.13□□□□□ -0.479e-8■■■■□ 22.2
LARP4Q71RC2 EPCAM-204ENST00000456133 1501 ntTSL 511.97□□□□□ -0.497e-21■■■■□ 22.2
LARP4Q71RC2 WDR1-204ENST00000499869 3054 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.559e-8■■■■□ 22.2
LARP4Q71RC2 KIAA0319L-208ENST00000469892 889 ntTSL 511.38□□□□□ -0.599e-8■■■■□ 22.2
LARP4Q71RC2 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.599e-8■■■■□ 22.2
LARP4Q71RC2 AVL9-202ENST00000409301 4336 ntTSL 5 BASIC10.93□□□□□ -0.669e-8■■■■□ 22.2
LARP4Q71RC2 NKTR-201ENST00000232978 7343 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.729e-8■■■■□ 22.2
LARP4Q71RC2 METAP2-210ENST00000551840 1874 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.829e-8■■■■□ 22.2
LARP4Q71RC2 KIAA0319L-205ENST00000440579 2171 ntTSL 29.47□□□□□ -0.899e-8■■■■□ 22.2
LARP4Q71RC2 METAP2-202ENST00000323666 3601 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.959e-8■■■■□ 22.2
LARP4Q71RC2 KIAA0319L-220ENST00000494948 766 ntTSL 48.67□□□□□ -1.029e-8■■■■□ 22.2
LARP4Q71RC2 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC8.39□□□□□ -1.071e-6■■■■□ 22.2
LARP4Q71RC2 AVL9-203ENST00000446718 6372 ntTSL 57.86□□□□□ -1.159e-8■■■■□ 22.2
LARP4Q71RC2 INVS-204ENST00000460636 954 ntTSL 57.25□□□□□ -1.255e-7■■■■□ 22.2
LARP4Q71RC2 NKTR-211ENST00000468735 7964 ntTSL 27.15□□□□□ -1.269e-8■■■■□ 22.2
LARP4Q71RC2 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC6.57□□□□□ -1.369e-8■■■■□ 22.2
LARP4Q71RC2 SEPT7-204ENST00000425198 6952 ntTSL 56.1□□□□□ -1.439e-8■■■■□ 22.2
LARP4Q71RC2 SEPT7-210ENST00000492940 556 ntTSL 26.03□□□□□ -1.449e-8■■■■□ 22.2
LARP4Q71RC2 NKTR-206ENST00000460807 894 ntTSL 25.86□□□□□ -1.479e-8■■■■□ 22.2
LARP4Q71RC2 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.519e-8■■■■□ 22.2
LARP4Q71RC2 SEPT7-217ENST00000635175 1464 ntTSL 25.59□□□□□ -1.519e-8■■■■□ 22.2
LARP4Q71RC2 SEPT7-209ENST00000485569 333 ntTSL 35.03□□□□□ -1.69e-8■■■■□ 22.2
LARP4Q71RC2 NKTR-213ENST00000472258 576 ntTSL 24.76□□□□□ -1.659e-8■■■■□ 22.2
LARP4Q71RC2 NKTR-217ENST00000498730 4912 ntTSL 23.87□□□□□ -1.799e-8■■■■□ 22.2
LARP4Q71RC2 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.8□□□□□ -1.89e-8■■■■□ 22.2
LARP4Q71RC2 NKTR-202ENST00000429888 7325 ntTSL 53.72□□□□□ -1.819e-8■■■■□ 22.2
LARP4Q71RC2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.43□□□□□ -2.021e-6■■■■□ 22.2
LARP4Q71RC2 NKTR-209ENST00000465584 3839 ntTSL 22.35□□□□□ -2.039e-8■■■■□ 22.2
LARP4Q71RC2 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC11.15□□□□□ -0.627e-8■■■■□ 22.1
LARP4Q71RC2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.162e-7■■■■□ 22.1
LARP4Q71RC2 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.122e-7■■■■□ 22.1
LARP4Q71RC2 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC12.52□□□□□ -0.413e-15■■■■□ 22.1
LARP4Q71RC2 C12orf57-202ENST00000537087 662 ntTSL 2 BASIC10.32□□□□□ -0.763e-15■■■■□ 22.1
LARP4Q71RC2 C12orf57-201ENST00000229281 560 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.813e-15■■■■□ 22.1
LARP4Q71RC2 C12orf57-205ENST00000542222 640 ntTSL 28.37□□□□□ -1.073e-15■■■■□ 22.1
LARP4Q71RC2 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC12.8□□□□□ -0.362e-7■■■■□ 22.1
LARP4Q71RC2 WDR83OS-202ENST00000596731 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.372e-7■■■■□ 22.1
LARP4Q71RC2 WDR83OS-201ENST00000222190 599 ntAPPRIS ALT1 TSL 2 BASIC9.82□□□□□ -0.842e-7■■■■□ 22.1
LARP4Q71RC2 ATP6V0E2-208ENST00000483478 475 ntTSL 312.16□□□□□ -0.461e-9■■■■□ 22.1
LARP4Q71RC2 ATP6V0E2-210ENST00000495408 569 ntTSL 49.36□□□□□ -0.911e-9■■■■□ 22.1
LARP4Q71RC2 ATP6V0E2-209ENST00000490092 501 ntTSL 47.27□□□□□ -1.251e-9■■■■□ 22.1
LARP4Q71RC2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.294e-9■■■■□ 22.1
LARP4Q71RC2 CTSL-206ENST00000495822 988 ntTSL 1 (best)13.54□□□□□ -0.244e-9■■■■□ 22.1
LARP4Q71RC2 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.34e-9■■■■□ 22.1
LARP4Q71RC2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.884e-11■■■■□ 22.1
LARP4Q71RC2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.744e-11■■■■□ 22.1
LARP4Q71RC2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.55■□□□□ 0.724e-11■■■■□ 22.1
LARP4Q71RC2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.98■□□□□ 0.634e-11■■■■□ 22.1
LARP4Q71RC2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.4■□□□□ 0.544e-11■■■■□ 22.1
LARP4Q71RC2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.01■□□□□ 0.474e-11■■■■□ 22.1
LARP4Q71RC2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.86■□□□□ 0.454e-11■■■■□ 22.1
LARP4Q71RC2 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.243e-8■■■■□ 22.1
LARP4Q71RC2 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.333e-8■■■■□ 22.1
LARP4Q71RC2 AL132780.3-201ENST00000555074 835 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.884e-11■■■■□ 22.1
LARP4Q71RC2 HAUS4-213ENST00000554446 1129 ntTSL 58.87□□□□□ -0.994e-11■■■■□ 22.1
LARP4Q71RC2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.29■□□□□ 0.25e-15■■■■□ 22
LARP4Q71RC2 CALU-201ENST00000249364 3357 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.545e-15■■■■□ 22
LARP4Q71RC2 CALU-206ENST00000542996 4225 ntTSL 1 (best) BASIC10.69□□□□□ -0.75e-15■■■■□ 22
LARP4Q71RC2 CALU-204ENST00000493278 589 ntTSL 34.95□□□□□ -1.625e-15■■■■□ 22
LARP4Q71RC2 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.43□□□□□ -0.261e-6■■■■□ 22
LARP4Q71RC2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.04■□□□□ 0.325e-8■■■■□ 22
LARP4Q71RC2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.63■□□□□ 0.732e-6■■■■□ 22
LARP4Q71RC2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.05■□□□□ 0.482e-6■■■■□ 22
LARP4Q71RC2 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.37□□□□□ -0.272e-6■■■■□ 22
LARP4Q71RC2 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.06□□□□□ -0.322e-6■■■■□ 22
LARP4Q71RC2 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.086e-7■■■■□ 22
LARP4Q71RC2 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.216e-7■■■■□ 22
LARP4Q71RC2 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.296e-7■■■■□ 22
LARP4Q71RC2 COG5-208ENST00000475638 592 ntTSL 35.76□□□□□ -1.496e-7■■■■□ 22
LARP4Q71RC2 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.47□□□□□ -0.251e-7■■■■□ 22
LARP4Q71RC2 MIEN1-202ENST00000469568 825 ntTSL 219.02■□□□□ 0.642e-7■■■■□ 21.9
LARP4Q71RC2 MIEN1-204ENST00000498164 925 ntTSL 219.02■□□□□ 0.642e-7■■■■□ 21.9
LARP4Q71RC2 MIEN1-206ENST00000582963 1999 nt18.17■□□□□ 0.52e-7■■■■□ 21.9
LARP4Q71RC2 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.312e-7■■■■□ 21.9
LARP4Q71RC2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.7■□□□□ 0.12e-7■■■■□ 21.9
LARP4Q71RC2 MIEN1-203ENST00000474210 706 ntTSL 215.3■□□□□ 0.042e-7■■■■□ 21.9
LARP4Q71RC2 S100A1-205ENST00000469893 2621 ntTSL 1 (best)11.36□□□□□ -0.596e-12■■■■□ 21.9
LARP4Q71RC2 S100A1-203ENST00000368698 784 ntTSL 2 BASIC9.8□□□□□ -0.846e-12■■■■□ 21.9
LARP4Q71RC2 S100A1-201ENST00000292169 594 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.846e-12■■■■□ 21.9
LARP4Q71RC2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.092e-7■■■■□ 21.9
LARP4Q71RC2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 02e-7■■■■□ 21.9
LARP4Q71RC2 TMEM205-203ENST00000585722 1147 ntTSL 215.07■□□□□ 02e-7■■■■□ 21.9
LARP4Q71RC2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 02e-7■■■■□ 21.9
LARP4Q71RC2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 02e-7■■■■□ 21.9
LARP4Q71RC2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.072e-7■■■■□ 21.9
LARP4Q71RC2 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.162e-7■■■■□ 21.9
LARP4Q71RC2 TMEM205-206ENST00000586701 563 ntTSL 514.07□□□□□ -0.162e-7■■■■□ 21.9
LARP4Q71RC2 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.162e-7■■■■□ 21.9
LARP4Q71RC2 TMEM205-209ENST00000588321 1310 ntTSL 513.91□□□□□ -0.182e-7■■■■□ 21.9
LARP4Q71RC2 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.332e-7■■■■□ 21.9
LARP4Q71RC2 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.432e-7■■■■□ 21.9
LARP4Q71RC2 TMEM205-204ENST00000586218 593 ntTSL 2 BASIC11.53□□□□□ -0.562e-7■■■■□ 21.9
LARP4Q71RC2 TMEM205-215ENST00000592952 428 ntTSL 510.08□□□□□ -0.82e-7■■■■□ 21.9
LARP4Q71RC2 TMEM205-212ENST00000590482 619 ntTSL 59.33□□□□□ -0.922e-7■■■■□ 21.9
LARP4Q71RC2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.194e-8■■■■□ 21.9
LARP4Q71RC2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.664e-8■■■■□ 21.9
LARP4Q71RC2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.21■□□□□ 0.354e-8■■■■□ 21.9
LARP4Q71RC2 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.52■□□□□ 0.244e-8■■■■□ 21.9
LARP4Q71RC2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.124e-8■■■■□ 21.9
Retrieved 100 of 15,922 protein–RNA pairs in 226 ms