Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C9orf139Q6ZV77 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.67■□□□□ 0.42
C9orf139Q6ZV77 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.67■□□□□ 0.42
C9orf139Q6ZV77 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf139Q6ZV77 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
C9orf139Q6ZV77 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.66■□□□□ 0.42
C9orf139Q6ZV77 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.66■□□□□ 0.42
C9orf139Q6ZV77 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.66■□□□□ 0.42
C9orf139Q6ZV77 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.66■□□□□ 0.42
C9orf139Q6ZV77 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.66■□□□□ 0.42
C9orf139Q6ZV77 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.66■□□□□ 0.42
C9orf139Q6ZV77 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf139Q6ZV77 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf139Q6ZV77 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.66■□□□□ 0.42
C9orf139Q6ZV77 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf139Q6ZV77 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.65■□□□□ 0.42
C9orf139Q6ZV77 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf139Q6ZV77 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.65■□□□□ 0.42
C9orf139Q6ZV77 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf139Q6ZV77 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
C9orf139Q6ZV77 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf139Q6ZV77 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf139Q6ZV77 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf139Q6ZV77 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf139Q6ZV77 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
C9orf139Q6ZV77 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
C9orf139Q6ZV77 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf139Q6ZV77 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
C9orf139Q6ZV77 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
C9orf139Q6ZV77 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf139Q6ZV77 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf139Q6ZV77 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf139Q6ZV77 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf139Q6ZV77 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.64■□□□□ 0.41
C9orf139Q6ZV77 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf139Q6ZV77 AC006015.1-201ENST00000429970 570 ntBASIC17.64■□□□□ 0.41
C9orf139Q6ZV77 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.64■□□□□ 0.41
C9orf139Q6ZV77 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.64■□□□□ 0.41
C9orf139Q6ZV77 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.64■□□□□ 0.41
C9orf139Q6ZV77 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf139Q6ZV77 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf139Q6ZV77 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf139Q6ZV77 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
C9orf139Q6ZV77 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
C9orf139Q6ZV77 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf139Q6ZV77 ABCB10P4-201ENST00000566803 2184 ntBASIC17.63■□□□□ 0.41
C9orf139Q6ZV77 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C9orf139Q6ZV77 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
C9orf139Q6ZV77 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
C9orf139Q6ZV77 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C9orf139Q6ZV77 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.63■□□□□ 0.41
C9orf139Q6ZV77 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.63■□□□□ 0.41
C9orf139Q6ZV77 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.63■□□□□ 0.41
C9orf139Q6ZV77 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.63■□□□□ 0.41
C9orf139Q6ZV77 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.63■□□□□ 0.41
C9orf139Q6ZV77 KRT18P61-201ENST00000585825 1298 ntBASIC17.63■□□□□ 0.41
C9orf139Q6ZV77 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C9orf139Q6ZV77 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C9orf139Q6ZV77 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
C9orf139Q6ZV77 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.63■□□□□ 0.41
C9orf139Q6ZV77 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
C9orf139Q6ZV77 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.62■□□□□ 0.41
C9orf139Q6ZV77 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C9orf139Q6ZV77 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.62■□□□□ 0.41
C9orf139Q6ZV77 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.62■□□□□ 0.41
C9orf139Q6ZV77 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C9orf139Q6ZV77 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C9orf139Q6ZV77 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.62■□□□□ 0.41
C9orf139Q6ZV77 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
C9orf139Q6ZV77 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.62■□□□□ 0.41
C9orf139Q6ZV77 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.62■□□□□ 0.41
C9orf139Q6ZV77 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
C9orf139Q6ZV77 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
C9orf139Q6ZV77 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C9orf139Q6ZV77 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C9orf139Q6ZV77 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.62■□□□□ 0.41
C9orf139Q6ZV77 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
C9orf139Q6ZV77 AP004607.4-201ENST00000530158 1459 ntBASIC17.62■□□□□ 0.41
C9orf139Q6ZV77 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C9orf139Q6ZV77 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
C9orf139Q6ZV77 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
C9orf139Q6ZV77 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
C9orf139Q6ZV77 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
C9orf139Q6ZV77 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C9orf139Q6ZV77 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C9orf139Q6ZV77 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.61■□□□□ 0.41
C9orf139Q6ZV77 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.61■□□□□ 0.41
C9orf139Q6ZV77 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
C9orf139Q6ZV77 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
C9orf139Q6ZV77 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
C9orf139Q6ZV77 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
C9orf139Q6ZV77 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C9orf139Q6ZV77 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
C9orf139Q6ZV77 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C9orf139Q6ZV77 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
C9orf139Q6ZV77 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
C9orf139Q6ZV77 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.6■□□□□ 0.41
C9orf139Q6ZV77 KRT19P1-201ENST00000405746 1186 ntBASIC17.6■□□□□ 0.41
C9orf139Q6ZV77 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
C9orf139Q6ZV77 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms