Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PACS1Q6VY07 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
PACS1Q6VY07 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PACS1Q6VY07 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.04■■□□□ 1.12
PACS1Q6VY07 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
PACS1Q6VY07 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PACS1Q6VY07 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
PACS1Q6VY07 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PACS1Q6VY07 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PACS1Q6VY07 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.03■■□□□ 1.12
PACS1Q6VY07 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PACS1Q6VY07 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.03■■□□□ 1.12
PACS1Q6VY07 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PACS1Q6VY07 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PACS1Q6VY07 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PACS1Q6VY07 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
PACS1Q6VY07 LINC01960-201ENST00000563759 1884 ntBASIC22.03■■□□□ 1.12
PACS1Q6VY07 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PACS1Q6VY07 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PACS1Q6VY07 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PACS1Q6VY07 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PACS1Q6VY07 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PACS1Q6VY07 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PACS1Q6VY07 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
PACS1Q6VY07 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
PACS1Q6VY07 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
PACS1Q6VY07 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.02■■□□□ 1.11
PACS1Q6VY07 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PACS1Q6VY07 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PACS1Q6VY07 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.01■■□□□ 1.11
PACS1Q6VY07 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PACS1Q6VY07 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.01■■□□□ 1.11
PACS1Q6VY07 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.01■■□□□ 1.11
PACS1Q6VY07 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PACS1Q6VY07 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.01■■□□□ 1.11
PACS1Q6VY07 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.01■■□□□ 1.11
PACS1Q6VY07 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PACS1Q6VY07 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
PACS1Q6VY07 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22■■□□□ 1.11
PACS1Q6VY07 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22■■□□□ 1.11
PACS1Q6VY07 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22■■□□□ 1.11
PACS1Q6VY07 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22■■□□□ 1.11
PACS1Q6VY07 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22■■□□□ 1.11
PACS1Q6VY07 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22■■□□□ 1.11
PACS1Q6VY07 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
PACS1Q6VY07 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22■■□□□ 1.11
PACS1Q6VY07 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PACS1Q6VY07 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22■■□□□ 1.11
PACS1Q6VY07 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22■■□□□ 1.11
PACS1Q6VY07 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.99■■□□□ 1.11
PACS1Q6VY07 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PACS1Q6VY07 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PACS1Q6VY07 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.99■■□□□ 1.11
PACS1Q6VY07 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
PACS1Q6VY07 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
PACS1Q6VY07 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
PACS1Q6VY07 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PACS1Q6VY07 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.99■■□□□ 1.11
PACS1Q6VY07 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.99■■□□□ 1.11
PACS1Q6VY07 AC092171.4-201ENST00000609130 632 ntBASIC21.99■■□□□ 1.11
PACS1Q6VY07 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.99■■□□□ 1.11
PACS1Q6VY07 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
PACS1Q6VY07 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
PACS1Q6VY07 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.99■■□□□ 1.11
PACS1Q6VY07 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.98■■□□□ 1.11
PACS1Q6VY07 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.98■■□□□ 1.11
PACS1Q6VY07 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.98■■□□□ 1.11
PACS1Q6VY07 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
PACS1Q6VY07 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PACS1Q6VY07 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PACS1Q6VY07 AC099791.2-201ENST00000605725 427 ntBASIC21.98■■□□□ 1.11
PACS1Q6VY07 AL499627.2-201ENST00000606283 725 ntBASIC21.98■■□□□ 1.11
PACS1Q6VY07 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.98■■□□□ 1.11
PACS1Q6VY07 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
PACS1Q6VY07 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PACS1Q6VY07 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PACS1Q6VY07 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PACS1Q6VY07 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
PACS1Q6VY07 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PACS1Q6VY07 FBXW4P1-201ENST00000426721 2239 ntBASIC21.97■■□□□ 1.11
PACS1Q6VY07 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PACS1Q6VY07 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PACS1Q6VY07 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.97■■□□□ 1.11
PACS1Q6VY07 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.97■■□□□ 1.11
PACS1Q6VY07 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PACS1Q6VY07 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.97■■□□□ 1.11
PACS1Q6VY07 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PACS1Q6VY07 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PACS1Q6VY07 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
PACS1Q6VY07 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PACS1Q6VY07 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.96■■□□□ 1.11
PACS1Q6VY07 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PACS1Q6VY07 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
PACS1Q6VY07 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.96■■□□□ 1.11
PACS1Q6VY07 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PACS1Q6VY07 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PACS1Q6VY07 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PACS1Q6VY07 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PACS1Q6VY07 AC006455.2-201ENST00000429931 906 ntBASIC21.96■■□□□ 1.11
PACS1Q6VY07 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms