Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TREML4Q6UXN2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TREML4Q6UXN2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TREML4Q6UXN2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TREML4Q6UXN2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TREML4Q6UXN2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TREML4Q6UXN2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TREML4Q6UXN2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TREML4Q6UXN2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TREML4Q6UXN2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TREML4Q6UXN2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TREML4Q6UXN2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TREML4Q6UXN2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TREML4Q6UXN2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TREML4Q6UXN2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TREML4Q6UXN2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.77■□□□□ 0.44
TREML4Q6UXN2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TREML4Q6UXN2 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.77■□□□□ 0.44
TREML4Q6UXN2 AC011298.3-201ENST00000615796 283 ntBASIC17.77■□□□□ 0.44
TREML4Q6UXN2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TREML4Q6UXN2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TREML4Q6UXN2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
TREML4Q6UXN2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.76■□□□□ 0.43
TREML4Q6UXN2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TREML4Q6UXN2 AC005703.6-201ENST00000623265 1329 ntBASIC17.76■□□□□ 0.43
TREML4Q6UXN2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.76■□□□□ 0.43
TREML4Q6UXN2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.76■□□□□ 0.43
TREML4Q6UXN2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TREML4Q6UXN2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TREML4Q6UXN2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TREML4Q6UXN2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TREML4Q6UXN2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TREML4Q6UXN2 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.76■□□□□ 0.43
TREML4Q6UXN2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TREML4Q6UXN2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.76■□□□□ 0.43
TREML4Q6UXN2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TREML4Q6UXN2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.76■□□□□ 0.43
TREML4Q6UXN2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TREML4Q6UXN2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TREML4Q6UXN2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TREML4Q6UXN2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TREML4Q6UXN2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.76■□□□□ 0.43
TREML4Q6UXN2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
TREML4Q6UXN2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TREML4Q6UXN2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TREML4Q6UXN2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TREML4Q6UXN2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TREML4Q6UXN2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.75■□□□□ 0.43
TREML4Q6UXN2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.75■□□□□ 0.43
TREML4Q6UXN2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.75■□□□□ 0.43
TREML4Q6UXN2 AL138724.1-201ENST00000606771 1088 ntBASIC17.75■□□□□ 0.43
TREML4Q6UXN2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TREML4Q6UXN2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TREML4Q6UXN2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.75■□□□□ 0.43
TREML4Q6UXN2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TREML4Q6UXN2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TREML4Q6UXN2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TREML4Q6UXN2 AC007375.3-201ENST00000600936 2314 ntBASIC17.75■□□□□ 0.43
TREML4Q6UXN2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREML4Q6UXN2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREML4Q6UXN2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREML4Q6UXN2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREML4Q6UXN2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREML4Q6UXN2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.74■□□□□ 0.43
TREML4Q6UXN2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREML4Q6UXN2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREML4Q6UXN2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.74■□□□□ 0.43
TREML4Q6UXN2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.74■□□□□ 0.43
TREML4Q6UXN2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.74■□□□□ 0.43
TREML4Q6UXN2 KRT18P5-201ENST00000436075 1291 ntBASIC17.74■□□□□ 0.43
TREML4Q6UXN2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.74■□□□□ 0.43
TREML4Q6UXN2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.74■□□□□ 0.43
TREML4Q6UXN2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.74■□□□□ 0.43
TREML4Q6UXN2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TREML4Q6UXN2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.74■□□□□ 0.43
TREML4Q6UXN2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.74■□□□□ 0.43
TREML4Q6UXN2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.74■□□□□ 0.43
TREML4Q6UXN2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREML4Q6UXN2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREML4Q6UXN2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.74■□□□□ 0.43
TREML4Q6UXN2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREML4Q6UXN2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREML4Q6UXN2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREML4Q6UXN2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TREML4Q6UXN2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TREML4Q6UXN2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREML4Q6UXN2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREML4Q6UXN2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREML4Q6UXN2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TREML4Q6UXN2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREML4Q6UXN2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.73■□□□□ 0.43
TREML4Q6UXN2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREML4Q6UXN2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TREML4Q6UXN2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TREML4Q6UXN2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
TREML4Q6UXN2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.73■□□□□ 0.43
TREML4Q6UXN2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TREML4Q6UXN2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREML4Q6UXN2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.73■□□□□ 0.43
TREML4Q6UXN2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms