Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.32■□□□□ 0.84
HLA-DQA1Q5Y7H0 C9orf163-202ENST00000624034 2573 ntBASIC20.32■□□□□ 0.84
HLA-DQA1Q5Y7H0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
HLA-DQA1Q5Y7H0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
HLA-DQA1Q5Y7H0 SUDS3P1-201ENST00000505831 966 ntBASIC20.32■□□□□ 0.84
HLA-DQA1Q5Y7H0 AL031432.3-201ENST00000607698 485 ntBASIC20.32■□□□□ 0.84
HLA-DQA1Q5Y7H0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQA1Q5Y7H0 AL136967.2-201ENST00000623968 743 ntBASIC20.32■□□□□ 0.84
HLA-DQA1Q5Y7H0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
HLA-DQA1Q5Y7H0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
HLA-DQA1Q5Y7H0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HLA-DQA1Q5Y7H0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DQA1Q5Y7H0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DQA1Q5Y7H0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DQA1Q5Y7H0 AP005435.1-201ENST00000529293 1178 ntBASIC20.31■□□□□ 0.84
HLA-DQA1Q5Y7H0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.31■□□□□ 0.84
HLA-DQA1Q5Y7H0 CA15P2-201ENST00000611168 834 ntBASIC20.31■□□□□ 0.84
HLA-DQA1Q5Y7H0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
HLA-DQA1Q5Y7H0 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.31■□□□□ 0.84
HLA-DQA1Q5Y7H0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DQA1Q5Y7H0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
HLA-DQA1Q5Y7H0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.31■□□□□ 0.84
HLA-DQA1Q5Y7H0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HLA-DQA1Q5Y7H0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQA1Q5Y7H0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
HLA-DQA1Q5Y7H0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQA1Q5Y7H0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.3■□□□□ 0.84
HLA-DQA1Q5Y7H0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.3■□□□□ 0.84
HLA-DQA1Q5Y7H0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.3■□□□□ 0.84
HLA-DQA1Q5Y7H0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQA1Q5Y7H0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.3■□□□□ 0.84
HLA-DQA1Q5Y7H0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQA1Q5Y7H0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
HLA-DQA1Q5Y7H0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.3■□□□□ 0.84
HLA-DQA1Q5Y7H0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQA1Q5Y7H0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.3■□□□□ 0.84
HLA-DQA1Q5Y7H0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQA1Q5Y7H0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQA1Q5Y7H0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQA1Q5Y7H0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
HLA-DQA1Q5Y7H0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
HLA-DQA1Q5Y7H0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQA1Q5Y7H0 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQA1Q5Y7H0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQA1Q5Y7H0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQA1Q5Y7H0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.29■□□□□ 0.84
HLA-DQA1Q5Y7H0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.29■□□□□ 0.84
HLA-DQA1Q5Y7H0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
HLA-DQA1Q5Y7H0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQA1Q5Y7H0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQA1Q5Y7H0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.29■□□□□ 0.84
HLA-DQA1Q5Y7H0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HLA-DQA1Q5Y7H0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQA1Q5Y7H0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.29■□□□□ 0.84
HLA-DQA1Q5Y7H0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQA1Q5Y7H0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQA1Q5Y7H0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.28■□□□□ 0.84
HLA-DQA1Q5Y7H0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HLA-DQA1Q5Y7H0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQA1Q5Y7H0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQA1Q5Y7H0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.28■□□□□ 0.84
HLA-DQA1Q5Y7H0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQA1Q5Y7H0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.28■□□□□ 0.84
HLA-DQA1Q5Y7H0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQA1Q5Y7H0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
HLA-DQA1Q5Y7H0 AL031602.1-201ENST00000633169 911 ntBASIC20.28■□□□□ 0.84
HLA-DQA1Q5Y7H0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
HLA-DQA1Q5Y7H0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQA1Q5Y7H0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQA1Q5Y7H0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQA1Q5Y7H0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQA1Q5Y7H0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQA1Q5Y7H0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQA1Q5Y7H0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
HLA-DQA1Q5Y7H0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQA1Q5Y7H0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQA1Q5Y7H0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HLA-DQA1Q5Y7H0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.27■□□□□ 0.83
HLA-DQA1Q5Y7H0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HLA-DQA1Q5Y7H0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
HLA-DQA1Q5Y7H0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
HLA-DQA1Q5Y7H0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DQA1Q5Y7H0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
HLA-DQA1Q5Y7H0 AC010141.3-201ENST00000456659 717 ntBASIC20.26■□□□□ 0.83
HLA-DQA1Q5Y7H0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DQA1Q5Y7H0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.26■□□□□ 0.83
HLA-DQA1Q5Y7H0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DQA1Q5Y7H0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DQA1Q5Y7H0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DQA1Q5Y7H0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DQA1Q5Y7H0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.25■□□□□ 0.83
HLA-DQA1Q5Y7H0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DQA1Q5Y7H0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DQA1Q5Y7H0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DQA1Q5Y7H0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DQA1Q5Y7H0 IGHV3-19-201ENST00000521488 291 ntBASIC20.25■□□□□ 0.83
HLA-DQA1Q5Y7H0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.25■□□□□ 0.83
HLA-DQA1Q5Y7H0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DQA1Q5Y7H0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DQA1Q5Y7H0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms