Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBR4Q5T4S7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC12.23□□□□□ -0.45
UBR4Q5T4S7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC12.23□□□□□ -0.45
UBR4Q5T4S7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBR4Q5T4S7 KRT18P16-201ENST00000510337 1294 ntBASIC12.23□□□□□ -0.45
UBR4Q5T4S7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC12.23□□□□□ -0.45
UBR4Q5T4S7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
UBR4Q5T4S7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBR4Q5T4S7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UBR4Q5T4S7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
UBR4Q5T4S7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
UBR4Q5T4S7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBR4Q5T4S7 CYP2T1P-201ENST00000432607 1285 ntBASIC12.22□□□□□ -0.45
UBR4Q5T4S7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC12.22□□□□□ -0.45
UBR4Q5T4S7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
UBR4Q5T4S7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC12.22□□□□□ -0.45
UBR4Q5T4S7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UBR4Q5T4S7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC12.22□□□□□ -0.45
UBR4Q5T4S7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC12.22□□□□□ -0.45
UBR4Q5T4S7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC12.22□□□□□ -0.45
UBR4Q5T4S7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC12.22□□□□□ -0.45
UBR4Q5T4S7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC12.22□□□□□ -0.45
UBR4Q5T4S7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC12.21□□□□□ -0.45
UBR4Q5T4S7 AC104187.1-201ENST00000607510 612 ntBASIC12.21□□□□□ -0.45
UBR4Q5T4S7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UBR4Q5T4S7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC12.21□□□□□ -0.45
UBR4Q5T4S7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC12.21□□□□□ -0.45
UBR4Q5T4S7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
UBR4Q5T4S7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBR4Q5T4S7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UBR4Q5T4S7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBR4Q5T4S7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC12.21□□□□□ -0.45
UBR4Q5T4S7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC12.21□□□□□ -0.46
UBR4Q5T4S7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC12.21□□□□□ -0.46
UBR4Q5T4S7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC12.21□□□□□ -0.46
UBR4Q5T4S7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
UBR4Q5T4S7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC12.21□□□□□ -0.46
UBR4Q5T4S7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
UBR4Q5T4S7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
UBR4Q5T4S7 CYP2T3P-201ENST00000601990 817 ntBASIC12.21□□□□□ -0.46
UBR4Q5T4S7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
UBR4Q5T4S7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC12.21□□□□□ -0.46
UBR4Q5T4S7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
UBR4Q5T4S7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC12.21□□□□□ -0.46
UBR4Q5T4S7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC12.21□□□□□ -0.46
UBR4Q5T4S7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBR4Q5T4S7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC12.2□□□□□ -0.46
UBR4Q5T4S7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBR4Q5T4S7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
UBR4Q5T4S7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
UBR4Q5T4S7 KRT87P-202ENST00000534226 1464 ntBASIC12.2□□□□□ -0.46
UBR4Q5T4S7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UBR4Q5T4S7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UBR4Q5T4S7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBR4Q5T4S7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
UBR4Q5T4S7 FAM197Y4-202ENST00000622692 608 ntBASIC12.2□□□□□ -0.46
UBR4Q5T4S7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBR4Q5T4S7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
UBR4Q5T4S7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UBR4Q5T4S7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
UBR4Q5T4S7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC12.2□□□□□ -0.46
UBR4Q5T4S7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC12.2□□□□□ -0.46
UBR4Q5T4S7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UBR4Q5T4S7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBR4Q5T4S7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBR4Q5T4S7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBR4Q5T4S7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBR4Q5T4S7 AC091874.3-201ENST00000512672 1195 ntBASIC12.2□□□□□ -0.46
UBR4Q5T4S7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC12.2□□□□□ -0.46
UBR4Q5T4S7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC12.2□□□□□ -0.46
UBR4Q5T4S7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UBR4Q5T4S7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
UBR4Q5T4S7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBR4Q5T4S7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBR4Q5T4S7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBR4Q5T4S7 BX276092.2-201ENST00000417668 665 ntBASIC12.19□□□□□ -0.46
UBR4Q5T4S7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
UBR4Q5T4S7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBR4Q5T4S7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
UBR4Q5T4S7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UBR4Q5T4S7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBR4Q5T4S7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBR4Q5T4S7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC12.19□□□□□ -0.46
UBR4Q5T4S7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC12.19□□□□□ -0.46
UBR4Q5T4S7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.19□□□□□ -0.46
UBR4Q5T4S7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UBR4Q5T4S7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UBR4Q5T4S7 AL353708.3-201ENST00000610272 989 ntBASIC12.19□□□□□ -0.46
UBR4Q5T4S7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
UBR4Q5T4S7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
UBR4Q5T4S7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
UBR4Q5T4S7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBR4Q5T4S7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.18□□□□□ -0.46
UBR4Q5T4S7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
UBR4Q5T4S7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UBR4Q5T4S7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
UBR4Q5T4S7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC12.18□□□□□ -0.46
UBR4Q5T4S7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC12.18□□□□□ -0.46
UBR4Q5T4S7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UBR4Q5T4S7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms