Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRK2Q5S007 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LRRK2Q5S007 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LRRK2Q5S007 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRK2Q5S007 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.27■□□□□ 0.68
LRRK2Q5S007 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.27■□□□□ 0.68
LRRK2Q5S007 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.27■□□□□ 0.68
LRRK2Q5S007 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRK2Q5S007 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRRK2Q5S007 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRK2Q5S007 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRK2Q5S007 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRK2Q5S007 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRK2Q5S007 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LRRK2Q5S007 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRK2Q5S007 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRK2Q5S007 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.26■□□□□ 0.67
LRRK2Q5S007 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRK2Q5S007 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.26■□□□□ 0.67
LRRK2Q5S007 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRK2Q5S007 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
LRRK2Q5S007 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.26■□□□□ 0.67
LRRK2Q5S007 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRK2Q5S007 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
LRRK2Q5S007 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRK2Q5S007 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
LRRK2Q5S007 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRK2Q5S007 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRK2Q5S007 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.25■□□□□ 0.67
LRRK2Q5S007 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.25■□□□□ 0.67
LRRK2Q5S007 LINC01023-201ENST00000606054 436 ntBASIC19.25■□□□□ 0.67
LRRK2Q5S007 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LRRK2Q5S007 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LRRK2Q5S007 MIR718-201ENST00000390190 70 ntBASIC19.25■□□□□ 0.67
LRRK2Q5S007 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.25■□□□□ 0.67
LRRK2Q5S007 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRK2Q5S007 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRK2Q5S007 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRK2Q5S007 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRK2Q5S007 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRK2Q5S007 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.25■□□□□ 0.67
LRRK2Q5S007 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRK2Q5S007 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRK2Q5S007 UNC93B5-201ENST00000530315 699 ntBASIC19.24■□□□□ 0.67
LRRK2Q5S007 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.24■□□□□ 0.67
LRRK2Q5S007 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LRRK2Q5S007 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.24■□□□□ 0.67
LRRK2Q5S007 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.24■□□□□ 0.67
LRRK2Q5S007 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRK2Q5S007 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRK2Q5S007 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRK2Q5S007 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.24■□□□□ 0.67
LRRK2Q5S007 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRK2Q5S007 AC073648.6-201ENST00000641589 218 ntBASIC19.24■□□□□ 0.67
LRRK2Q5S007 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRK2Q5S007 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
LRRK2Q5S007 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRK2Q5S007 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRK2Q5S007 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRK2Q5S007 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRK2Q5S007 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRK2Q5S007 AC026366.1-201ENST00000488803 879 ntBASIC19.23■□□□□ 0.67
LRRK2Q5S007 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.23■□□□□ 0.67
LRRK2Q5S007 AP001160.3-201ENST00000601484 763 ntBASIC19.23■□□□□ 0.67
LRRK2Q5S007 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRK2Q5S007 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRK2Q5S007 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRK2Q5S007 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.23■□□□□ 0.67
LRRK2Q5S007 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.23■□□□□ 0.67
LRRK2Q5S007 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.23■□□□□ 0.67
LRRK2Q5S007 MIR4497-201ENST00000583208 89 ntBASIC19.23■□□□□ 0.67
LRRK2Q5S007 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRK2Q5S007 AL445228.2-201ENST00000605589 952 ntBASIC19.23■□□□□ 0.67
LRRK2Q5S007 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRK2Q5S007 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.23■□□□□ 0.67
LRRK2Q5S007 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.22■□□□□ 0.67
LRRK2Q5S007 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRRK2Q5S007 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRRK2Q5S007 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.22■□□□□ 0.67
LRRK2Q5S007 LINC01529-204ENST00000636474 1715 ntBASIC19.22■□□□□ 0.67
LRRK2Q5S007 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LRRK2Q5S007 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRK2Q5S007 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.22■□□□□ 0.67
LRRK2Q5S007 AC135731.1-201ENST00000569415 2548 ntBASIC19.22■□□□□ 0.67
LRRK2Q5S007 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRK2Q5S007 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRK2Q5S007 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRRK2Q5S007 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRK2Q5S007 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.21■□□□□ 0.67
LRRK2Q5S007 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.21■□□□□ 0.67
LRRK2Q5S007 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.21■□□□□ 0.67
LRRK2Q5S007 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.21■□□□□ 0.67
LRRK2Q5S007 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.21■□□□□ 0.67
LRRK2Q5S007 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRK2Q5S007 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.21■□□□□ 0.67
LRRK2Q5S007 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRRK2Q5S007 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRRK2Q5S007 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.21■□□□□ 0.67
LRRK2Q5S007 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRK2Q5S007 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms