Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SGO1Q5FBB7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SGO1Q5FBB7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.16■□□□□ 0.98
SGO1Q5FBB7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SGO1Q5FBB7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.16■□□□□ 0.98
SGO1Q5FBB7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SGO1Q5FBB7 AC092053.2-201ENST00000640557 1818 ntBASIC21.15■□□□□ 0.98
SGO1Q5FBB7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SGO1Q5FBB7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SGO1Q5FBB7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SGO1Q5FBB7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SGO1Q5FBB7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.15■□□□□ 0.98
SGO1Q5FBB7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SGO1Q5FBB7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SGO1Q5FBB7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SGO1Q5FBB7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
SGO1Q5FBB7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SGO1Q5FBB7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.15■□□□□ 0.98
SGO1Q5FBB7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SGO1Q5FBB7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.15■□□□□ 0.98
SGO1Q5FBB7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SGO1Q5FBB7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.14■□□□□ 0.98
SGO1Q5FBB7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SGO1Q5FBB7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SGO1Q5FBB7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SGO1Q5FBB7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.14■□□□□ 0.98
SGO1Q5FBB7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SGO1Q5FBB7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
SGO1Q5FBB7 AC006455.2-201ENST00000429931 906 ntBASIC21.14■□□□□ 0.97
SGO1Q5FBB7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.14■□□□□ 0.97
SGO1Q5FBB7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SGO1Q5FBB7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
SGO1Q5FBB7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
SGO1Q5FBB7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SGO1Q5FBB7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SGO1Q5FBB7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SGO1Q5FBB7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SGO1Q5FBB7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SGO1Q5FBB7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SGO1Q5FBB7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.13■□□□□ 0.97
SGO1Q5FBB7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SGO1Q5FBB7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.13■□□□□ 0.97
SGO1Q5FBB7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SGO1Q5FBB7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SGO1Q5FBB7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SGO1Q5FBB7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.13■□□□□ 0.97
SGO1Q5FBB7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.13■□□□□ 0.97
SGO1Q5FBB7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.13■□□□□ 0.97
SGO1Q5FBB7 AC099791.2-201ENST00000605725 427 ntBASIC21.13■□□□□ 0.97
SGO1Q5FBB7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SGO1Q5FBB7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SGO1Q5FBB7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.13■□□□□ 0.97
SGO1Q5FBB7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SGO1Q5FBB7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.13■□□□□ 0.97
SGO1Q5FBB7 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.13■□□□□ 0.97
SGO1Q5FBB7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SGO1Q5FBB7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SGO1Q5FBB7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SGO1Q5FBB7 CLDN5-201ENST00000403084 2357 ntBASIC21.12■□□□□ 0.97
SGO1Q5FBB7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SGO1Q5FBB7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.12■□□□□ 0.97
SGO1Q5FBB7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SGO1Q5FBB7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SGO1Q5FBB7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SGO1Q5FBB7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SGO1Q5FBB7 AC241377.3-202ENST00000626088 1088 ntBASIC21.12■□□□□ 0.97
SGO1Q5FBB7 AC241585.3-202ENST00000628937 1088 ntBASIC21.12■□□□□ 0.97
SGO1Q5FBB7 AC245100.8-202ENST00000629247 1058 ntBASIC21.12■□□□□ 0.97
SGO1Q5FBB7 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.12■□□□□ 0.97
SGO1Q5FBB7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SGO1Q5FBB7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SGO1Q5FBB7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SGO1Q5FBB7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SGO1Q5FBB7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SGO1Q5FBB7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
SGO1Q5FBB7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.12■□□□□ 0.97
SGO1Q5FBB7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.12■□□□□ 0.97
SGO1Q5FBB7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SGO1Q5FBB7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SGO1Q5FBB7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.11■□□□□ 0.97
SGO1Q5FBB7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SGO1Q5FBB7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.11■□□□□ 0.97
SGO1Q5FBB7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SGO1Q5FBB7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SGO1Q5FBB7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.11■□□□□ 0.97
SGO1Q5FBB7 MIR3621-201ENST00000580529 85 ntBASIC21.11■□□□□ 0.97
SGO1Q5FBB7 AL499627.2-201ENST00000606283 725 ntBASIC21.11■□□□□ 0.97
SGO1Q5FBB7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SGO1Q5FBB7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SGO1Q5FBB7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SGO1Q5FBB7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.11■□□□□ 0.97
SGO1Q5FBB7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SGO1Q5FBB7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SGO1Q5FBB7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SGO1Q5FBB7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
SGO1Q5FBB7 C11orf96-202ENST00000528572 1834 ntBASIC21.11■□□□□ 0.97
SGO1Q5FBB7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SGO1Q5FBB7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.1■□□□□ 0.97
SGO1Q5FBB7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SGO1Q5FBB7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms