Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.61■□□□□ 0.89
RUNDC3AQ59EK9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RUNDC3AQ59EK9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.61■□□□□ 0.89
RUNDC3AQ59EK9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
RUNDC3AQ59EK9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RUNDC3AQ59EK9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.6■□□□□ 0.89
RUNDC3AQ59EK9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RUNDC3AQ59EK9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RUNDC3AQ59EK9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RUNDC3AQ59EK9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
RUNDC3AQ59EK9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RUNDC3AQ59EK9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RUNDC3AQ59EK9 AL024507.2-201ENST00000606070 2574 ntBASIC20.6■□□□□ 0.89
RUNDC3AQ59EK9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RUNDC3AQ59EK9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RUNDC3AQ59EK9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RUNDC3AQ59EK9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RUNDC3AQ59EK9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
RUNDC3AQ59EK9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RUNDC3AQ59EK9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RUNDC3AQ59EK9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RUNDC3AQ59EK9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RUNDC3AQ59EK9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.59■□□□□ 0.89
RUNDC3AQ59EK9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RUNDC3AQ59EK9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RUNDC3AQ59EK9 AC092028.1-203ENST00000608262 953 ntBASIC20.59■□□□□ 0.89
RUNDC3AQ59EK9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.59■□□□□ 0.89
RUNDC3AQ59EK9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RUNDC3AQ59EK9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
RUNDC3AQ59EK9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RUNDC3AQ59EK9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RUNDC3AQ59EK9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
RUNDC3AQ59EK9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RUNDC3AQ59EK9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RUNDC3AQ59EK9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RUNDC3AQ59EK9 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RUNDC3AQ59EK9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RUNDC3AQ59EK9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
RUNDC3AQ59EK9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RUNDC3AQ59EK9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.58■□□□□ 0.88
RUNDC3AQ59EK9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RUNDC3AQ59EK9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
RUNDC3AQ59EK9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RUNDC3AQ59EK9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RUNDC3AQ59EK9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RUNDC3AQ59EK9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.57■□□□□ 0.88
RUNDC3AQ59EK9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.57■□□□□ 0.88
RUNDC3AQ59EK9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RUNDC3AQ59EK9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
RUNDC3AQ59EK9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RUNDC3AQ59EK9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RUNDC3AQ59EK9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RUNDC3AQ59EK9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RUNDC3AQ59EK9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RUNDC3AQ59EK9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RUNDC3AQ59EK9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.57■□□□□ 0.88
RUNDC3AQ59EK9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RUNDC3AQ59EK9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RUNDC3AQ59EK9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.57■□□□□ 0.88
RUNDC3AQ59EK9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.57■□□□□ 0.88
RUNDC3AQ59EK9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RUNDC3AQ59EK9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RUNDC3AQ59EK9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RUNDC3AQ59EK9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RUNDC3AQ59EK9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RUNDC3AQ59EK9 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RUNDC3AQ59EK9 AC244015.2-201ENST00000616358 1861 ntBASIC20.56■□□□□ 0.88
RUNDC3AQ59EK9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RUNDC3AQ59EK9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RUNDC3AQ59EK9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.56■□□□□ 0.88
RUNDC3AQ59EK9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RUNDC3AQ59EK9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.56■□□□□ 0.88
RUNDC3AQ59EK9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RUNDC3AQ59EK9 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.56■□□□□ 0.88
RUNDC3AQ59EK9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.56■□□□□ 0.88
RUNDC3AQ59EK9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RUNDC3AQ59EK9 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.56■□□□□ 0.88
RUNDC3AQ59EK9 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RUNDC3AQ59EK9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.56■□□□□ 0.88
RUNDC3AQ59EK9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RUNDC3AQ59EK9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RUNDC3AQ59EK9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RUNDC3AQ59EK9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RUNDC3AQ59EK9 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RUNDC3AQ59EK9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.55■□□□□ 0.88
RUNDC3AQ59EK9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RUNDC3AQ59EK9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.55■□□□□ 0.88
RUNDC3AQ59EK9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RUNDC3AQ59EK9 C17orf82-201ENST00000623772 1530 ntBASIC20.55■□□□□ 0.88
RUNDC3AQ59EK9 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RUNDC3AQ59EK9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RUNDC3AQ59EK9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.55■□□□□ 0.88
RUNDC3AQ59EK9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RUNDC3AQ59EK9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RUNDC3AQ59EK9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RUNDC3AQ59EK9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.54■□□□□ 0.88
RUNDC3AQ59EK9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RUNDC3AQ59EK9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RUNDC3AQ59EK9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RUNDC3AQ59EK9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms