Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCGF3Q3KNV8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCGF3Q3KNV8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCGF3Q3KNV8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PCGF3Q3KNV8 AC009102.2-201ENST00000606772 1639 ntBASIC19.22■□□□□ 0.67
PCGF3Q3KNV8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCGF3Q3KNV8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.22■□□□□ 0.67
PCGF3Q3KNV8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
PCGF3Q3KNV8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCGF3Q3KNV8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCGF3Q3KNV8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
PCGF3Q3KNV8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCGF3Q3KNV8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PCGF3Q3KNV8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCGF3Q3KNV8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCGF3Q3KNV8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PCGF3Q3KNV8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PCGF3Q3KNV8 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCGF3Q3KNV8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PCGF3Q3KNV8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCGF3Q3KNV8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PCGF3Q3KNV8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PCGF3Q3KNV8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCGF3Q3KNV8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.21■□□□□ 0.67
PCGF3Q3KNV8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCGF3Q3KNV8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.21■□□□□ 0.67
PCGF3Q3KNV8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PCGF3Q3KNV8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCGF3Q3KNV8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.21■□□□□ 0.67
PCGF3Q3KNV8 AL139246.5-201ENST00000606645 996 ntBASIC19.21■□□□□ 0.67
PCGF3Q3KNV8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.21■□□□□ 0.67
PCGF3Q3KNV8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCGF3Q3KNV8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCGF3Q3KNV8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCGF3Q3KNV8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCGF3Q3KNV8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.2■□□□□ 0.66
PCGF3Q3KNV8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.2■□□□□ 0.66
PCGF3Q3KNV8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCGF3Q3KNV8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCGF3Q3KNV8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCGF3Q3KNV8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.2■□□□□ 0.66
PCGF3Q3KNV8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PCGF3Q3KNV8 AC241377.3-202ENST00000626088 1088 ntBASIC19.2■□□□□ 0.66
PCGF3Q3KNV8 AC241585.3-202ENST00000628937 1088 ntBASIC19.2■□□□□ 0.66
PCGF3Q3KNV8 AC245100.8-202ENST00000629247 1058 ntBASIC19.2■□□□□ 0.66
PCGF3Q3KNV8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.2■□□□□ 0.66
PCGF3Q3KNV8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.2■□□□□ 0.66
PCGF3Q3KNV8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.2■□□□□ 0.66
PCGF3Q3KNV8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCGF3Q3KNV8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCGF3Q3KNV8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCGF3Q3KNV8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCGF3Q3KNV8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
PCGF3Q3KNV8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.19■□□□□ 0.66
PCGF3Q3KNV8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCGF3Q3KNV8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
PCGF3Q3KNV8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.19■□□□□ 0.66
PCGF3Q3KNV8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
PCGF3Q3KNV8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCGF3Q3KNV8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCGF3Q3KNV8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.19■□□□□ 0.66
PCGF3Q3KNV8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.19■□□□□ 0.66
PCGF3Q3KNV8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCGF3Q3KNV8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PCGF3Q3KNV8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.19■□□□□ 0.66
PCGF3Q3KNV8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PCGF3Q3KNV8 C17orf82-201ENST00000623772 1530 ntBASIC19.19■□□□□ 0.66
PCGF3Q3KNV8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCGF3Q3KNV8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCGF3Q3KNV8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCGF3Q3KNV8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCGF3Q3KNV8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PCGF3Q3KNV8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PCGF3Q3KNV8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCGF3Q3KNV8 AC096631.2-201ENST00000436136 790 ntBASIC19.18■□□□□ 0.66
PCGF3Q3KNV8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.18■□□□□ 0.66
PCGF3Q3KNV8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCGF3Q3KNV8 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.18■□□□□ 0.66
PCGF3Q3KNV8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCGF3Q3KNV8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCGF3Q3KNV8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCGF3Q3KNV8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCGF3Q3KNV8 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCGF3Q3KNV8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCGF3Q3KNV8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCGF3Q3KNV8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCGF3Q3KNV8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCGF3Q3KNV8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCGF3Q3KNV8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCGF3Q3KNV8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCGF3Q3KNV8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PCGF3Q3KNV8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.17■□□□□ 0.66
PCGF3Q3KNV8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCGF3Q3KNV8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCGF3Q3KNV8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCGF3Q3KNV8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.17■□□□□ 0.66
PCGF3Q3KNV8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCGF3Q3KNV8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCGF3Q3KNV8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCGF3Q3KNV8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms