Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H3AP68431 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H3AP68431 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.1■□□□□ 0.65
HIST1H3AP68431 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H3AP68431 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.1■□□□□ 0.65
HIST1H3AP68431 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
HIST1H3AP68431 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.1■□□□□ 0.65
HIST1H3AP68431 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H3AP68431 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.1■□□□□ 0.65
HIST1H3AP68431 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H3AP68431 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.1■□□□□ 0.65
HIST1H3AP68431 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
HIST1H3AP68431 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
HIST1H3AP68431 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
HIST1H3AP68431 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.1■□□□□ 0.65
HIST1H3AP68431 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.09■□□□□ 0.65
HIST1H3AP68431 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H3AP68431 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H3AP68431 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H3AP68431 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.09■□□□□ 0.65
HIST1H3AP68431 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H3AP68431 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
HIST1H3AP68431 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.09■□□□□ 0.65
HIST1H3AP68431 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.09■□□□□ 0.65
HIST1H3AP68431 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H3AP68431 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H3AP68431 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H3AP68431 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.09■□□□□ 0.65
HIST1H3AP68431 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
HIST1H3AP68431 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H3AP68431 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H3AP68431 AC011298.3-201ENST00000615796 283 ntBASIC19.09■□□□□ 0.65
HIST1H3AP68431 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H3AP68431 SYT6-210ENST00000641643 1587 ntBASIC19.09■□□□□ 0.65
HIST1H3AP68431 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H3AP68431 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H3AP68431 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.09■□□□□ 0.65
HIST1H3AP68431 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.09■□□□□ 0.65
HIST1H3AP68431 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST1H3AP68431 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST1H3AP68431 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST1H3AP68431 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HIST1H3AP68431 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.08■□□□□ 0.65
HIST1H3AP68431 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.08■□□□□ 0.65
HIST1H3AP68431 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
HIST1H3AP68431 AC068587.7-201ENST00000641602 218 ntBASIC19.08■□□□□ 0.64
HIST1H3AP68431 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
HIST1H3AP68431 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HIST1H3AP68431 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
HIST1H3AP68431 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HIST1H3AP68431 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HIST1H3AP68431 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HIST1H3AP68431 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HIST1H3AP68431 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.08■□□□□ 0.64
HIST1H3AP68431 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
HIST1H3AP68431 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST1H3AP68431 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST1H3AP68431 AC136469.2-201ENST00000623944 1028 ntBASIC19.07■□□□□ 0.64
HIST1H3AP68431 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.07■□□□□ 0.64
HIST1H3AP68431 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HIST1H3AP68431 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HIST1H3AP68431 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST1H3AP68431 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.06■□□□□ 0.64
HIST1H3AP68431 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.06■□□□□ 0.64
HIST1H3AP68431 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.06■□□□□ 0.64
HIST1H3AP68431 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.06■□□□□ 0.64
HIST1H3AP68431 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST1H3AP68431 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.06■□□□□ 0.64
HIST1H3AP68431 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.06■□□□□ 0.64
HIST1H3AP68431 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST1H3AP68431 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST1H3AP68431 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HIST1H3AP68431 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HIST1H3AP68431 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST1H3AP68431 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST1H3AP68431 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST1H3AP68431 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.06■□□□□ 0.64
HIST1H3AP68431 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
HIST1H3AP68431 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H3AP68431 C11orf96-202ENST00000528572 1834 ntBASIC19.05■□□□□ 0.64
HIST1H3AP68431 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
HIST1H3AP68431 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H3AP68431 AL136116.3-201ENST00000402907 1138 ntBASIC19.05■□□□□ 0.64
HIST1H3AP68431 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.05■□□□□ 0.64
HIST1H3AP68431 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.05■□□□□ 0.64
HIST1H3AP68431 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
HIST1H3AP68431 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.05■□□□□ 0.64
HIST1H3AP68431 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
HIST1H3AP68431 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H3AP68431 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H3AP68431 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H3AP68431 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H3AP68431 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H3AP68431 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H3AP68431 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H3AP68431 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H3AP68431 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H3AP68431 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H3AP68431 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H3AP68431 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms