Protein–RNA interactions for Protein: P62979

RPS27A, Ubiquitin-40S ribosomal protein S27a, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27AP62979 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
RPS27AP62979 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.73■□□□□ 0.59
RPS27AP62979 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS27AP62979 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS27AP62979 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS27AP62979 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RPS27AP62979 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS27AP62979 YBX1P4-201ENST00000392794 808 ntBASIC18.73■□□□□ 0.59
RPS27AP62979 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.73■□□□□ 0.59
RPS27AP62979 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.73■□□□□ 0.59
RPS27AP62979 MIR6722-201ENST00000617286 78 ntBASIC18.73■□□□□ 0.59
RPS27AP62979 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPS27AP62979 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS27AP62979 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.73■□□□□ 0.59
RPS27AP62979 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPS27AP62979 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPS27AP62979 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS27AP62979 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPS27AP62979 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.72■□□□□ 0.59
RPS27AP62979 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.72■□□□□ 0.59
RPS27AP62979 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.72■□□□□ 0.59
RPS27AP62979 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.72■□□□□ 0.59
RPS27AP62979 AC009086.3-201ENST00000623486 1008 ntBASIC18.72■□□□□ 0.59
RPS27AP62979 AC012354.3-201ENST00000623734 483 ntBASIC18.72■□□□□ 0.59
RPS27AP62979 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RPS27AP62979 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.72■□□□□ 0.59
RPS27AP62979 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RPS27AP62979 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS27AP62979 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RPS27AP62979 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS27AP62979 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RPS27AP62979 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS27AP62979 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RPS27AP62979 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
RPS27AP62979 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RPS27AP62979 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
RPS27AP62979 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.71■□□□□ 0.59
RPS27AP62979 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.71■□□□□ 0.59
RPS27AP62979 KRT8P33-201ENST00000508125 1423 ntBASIC18.71■□□□□ 0.59
RPS27AP62979 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS27AP62979 AC073130.3-201ENST00000624389 2278 ntBASIC18.71■□□□□ 0.59
RPS27AP62979 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS27AP62979 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS27AP62979 LINC01960-201ENST00000563759 1884 ntBASIC18.71■□□□□ 0.59
RPS27AP62979 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
RPS27AP62979 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
RPS27AP62979 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS27AP62979 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RPS27AP62979 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.7■□□□□ 0.58
RPS27AP62979 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS27AP62979 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS27AP62979 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
RPS27AP62979 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS27AP62979 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS27AP62979 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS27AP62979 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.7■□□□□ 0.58
RPS27AP62979 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS27AP62979 DUX4L4-201ENST00000566884 1269 ntBASIC18.7■□□□□ 0.58
RPS27AP62979 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.7■□□□□ 0.58
RPS27AP62979 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS27AP62979 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS27AP62979 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS27AP62979 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.7■□□□□ 0.58
RPS27AP62979 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS27AP62979 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS27AP62979 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.69■□□□□ 0.58
RPS27AP62979 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RPS27AP62979 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.69■□□□□ 0.58
RPS27AP62979 AC092667.1-201ENST00000434301 2586 ntBASIC18.69■□□□□ 0.58
RPS27AP62979 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS27AP62979 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS27AP62979 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.69■□□□□ 0.58
RPS27AP62979 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.69■□□□□ 0.58
RPS27AP62979 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.69■□□□□ 0.58
RPS27AP62979 AL033527.3-201ENST00000566366 1196 ntBASIC18.69■□□□□ 0.58
RPS27AP62979 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.69■□□□□ 0.58
RPS27AP62979 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS27AP62979 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS27AP62979 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS27AP62979 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS27AP62979 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS27AP62979 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RPS27AP62979 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPS27AP62979 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.68■□□□□ 0.58
RPS27AP62979 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS27AP62979 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPS27AP62979 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPS27AP62979 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS27AP62979 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS27AP62979 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS27AP62979 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS27AP62979 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPS27AP62979 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS27AP62979 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RPS27AP62979 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.68■□□□□ 0.58
RPS27AP62979 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS27AP62979 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS27AP62979 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS27AP62979 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPS27AP62979 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms