Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.18■□□□□ 0.66
LSM6P62312 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LSM6P62312 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.18■□□□□ 0.66
LSM6P62312 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LSM6P62312 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
LSM6P62312 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.18■□□□□ 0.66
LSM6P62312 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LSM6P62312 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LSM6P62312 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LSM6P62312 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LSM6P62312 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LSM6P62312 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.18■□□□□ 0.66
LSM6P62312 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LSM6P62312 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.17■□□□□ 0.66
LSM6P62312 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSM6P62312 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
LSM6P62312 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSM6P62312 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSM6P62312 SERBP1P1-201ENST00000396021 1160 ntBASIC19.17■□□□□ 0.66
LSM6P62312 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LSM6P62312 AC011298.3-201ENST00000615796 283 ntBASIC19.17■□□□□ 0.66
LSM6P62312 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSM6P62312 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSM6P62312 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.17■□□□□ 0.66
LSM6P62312 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.17■□□□□ 0.66
LSM6P62312 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LSM6P62312 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LSM6P62312 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.17■□□□□ 0.66
LSM6P62312 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSM6P62312 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSM6P62312 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSM6P62312 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
LSM6P62312 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.16■□□□□ 0.66
LSM6P62312 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LSM6P62312 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LSM6P62312 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LSM6P62312 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.16■□□□□ 0.66
LSM6P62312 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LSM6P62312 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LSM6P62312 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LSM6P62312 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.16■□□□□ 0.66
LSM6P62312 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LSM6P62312 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LSM6P62312 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LSM6P62312 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
LSM6P62312 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LSM6P62312 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSM6P62312 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSM6P62312 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.15■□□□□ 0.66
LSM6P62312 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LSM6P62312 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
LSM6P62312 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.15■□□□□ 0.66
LSM6P62312 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.15■□□□□ 0.66
LSM6P62312 AC136469.2-201ENST00000623944 1028 ntBASIC19.15■□□□□ 0.66
LSM6P62312 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSM6P62312 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LSM6P62312 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LSM6P62312 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LSM6P62312 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSM6P62312 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSM6P62312 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSM6P62312 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.15■□□□□ 0.66
LSM6P62312 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.15■□□□□ 0.66
LSM6P62312 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSM6P62312 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSM6P62312 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LSM6P62312 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LSM6P62312 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.14■□□□□ 0.66
LSM6P62312 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LSM6P62312 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.14■□□□□ 0.66
LSM6P62312 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LSM6P62312 C11orf96-202ENST00000528572 1834 ntBASIC19.14■□□□□ 0.65
LSM6P62312 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
LSM6P62312 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM6P62312 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LSM6P62312 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
LSM6P62312 AL136116.3-201ENST00000402907 1138 ntBASIC19.14■□□□□ 0.65
LSM6P62312 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.14■□□□□ 0.65
LSM6P62312 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.14■□□□□ 0.65
LSM6P62312 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.14■□□□□ 0.65
LSM6P62312 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.14■□□□□ 0.65
LSM6P62312 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM6P62312 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM6P62312 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM6P62312 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM6P62312 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LSM6P62312 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
LSM6P62312 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
LSM6P62312 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.14■□□□□ 0.65
LSM6P62312 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.14■□□□□ 0.65
LSM6P62312 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LSM6P62312 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.13■□□□□ 0.65
LSM6P62312 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LSM6P62312 AC087239.1-201ENST00000622671 572 ntBASIC19.13■□□□□ 0.65
LSM6P62312 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSM6P62312 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LSM6P62312 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSM6P62312 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSM6P62312 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSM6P62312 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms