Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.15■□□□□ 0.66
UBE2NP61088 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2NP61088 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.15■□□□□ 0.66
UBE2NP61088 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.15■□□□□ 0.66
UBE2NP61088 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2NP61088 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2NP61088 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.15■□□□□ 0.66
UBE2NP61088 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2NP61088 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2NP61088 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2NP61088 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
UBE2NP61088 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
UBE2NP61088 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.14■□□□□ 0.66
UBE2NP61088 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
UBE2NP61088 LINC01960-201ENST00000563759 1884 ntBASIC19.14■□□□□ 0.65
UBE2NP61088 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2NP61088 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.14■□□□□ 0.65
UBE2NP61088 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.14■□□□□ 0.65
UBE2NP61088 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.14■□□□□ 0.65
UBE2NP61088 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.14■□□□□ 0.65
UBE2NP61088 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2NP61088 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.14■□□□□ 0.65
UBE2NP61088 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2NP61088 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2NP61088 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2NP61088 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
UBE2NP61088 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
UBE2NP61088 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2NP61088 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.13■□□□□ 0.65
UBE2NP61088 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2NP61088 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2NP61088 AC010141.3-201ENST00000456659 717 ntBASIC19.13■□□□□ 0.65
UBE2NP61088 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.13■□□□□ 0.65
UBE2NP61088 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.13■□□□□ 0.65
UBE2NP61088 AL031602.1-201ENST00000633169 911 ntBASIC19.13■□□□□ 0.65
UBE2NP61088 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2NP61088 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.13■□□□□ 0.65
UBE2NP61088 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2NP61088 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2NP61088 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
UBE2NP61088 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2NP61088 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2NP61088 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
UBE2NP61088 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2NP61088 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2NP61088 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.12■□□□□ 0.65
UBE2NP61088 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.12■□□□□ 0.65
UBE2NP61088 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2NP61088 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2NP61088 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2NP61088 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2NP61088 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2NP61088 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.11■□□□□ 0.65
UBE2NP61088 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2NP61088 IRS3P-201ENST00000223076 1006 ntBASIC19.11■□□□□ 0.65
UBE2NP61088 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
UBE2NP61088 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.11■□□□□ 0.65
UBE2NP61088 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.11■□□□□ 0.65
UBE2NP61088 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.11■□□□□ 0.65
UBE2NP61088 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2NP61088 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.11■□□□□ 0.65
UBE2NP61088 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.11■□□□□ 0.65
UBE2NP61088 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2NP61088 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2NP61088 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.11■□□□□ 0.65
UBE2NP61088 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2NP61088 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.11■□□□□ 0.65
UBE2NP61088 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.1■□□□□ 0.65
UBE2NP61088 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2NP61088 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
UBE2NP61088 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2NP61088 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2NP61088 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.1■□□□□ 0.65
UBE2NP61088 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.1■□□□□ 0.65
UBE2NP61088 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2NP61088 ZNRF2P3-201ENST00000424200 374 ntBASIC19.1■□□□□ 0.65
UBE2NP61088 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.1■□□□□ 0.65
UBE2NP61088 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2NP61088 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.1■□□□□ 0.65
UBE2NP61088 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
UBE2NP61088 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
UBE2NP61088 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.1■□□□□ 0.65
UBE2NP61088 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2NP61088 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2NP61088 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.09■□□□□ 0.65
UBE2NP61088 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.09■□□□□ 0.65
UBE2NP61088 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.09■□□□□ 0.65
UBE2NP61088 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.09■□□□□ 0.65
UBE2NP61088 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.09■□□□□ 0.65
UBE2NP61088 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
UBE2NP61088 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2NP61088 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2NP61088 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
UBE2NP61088 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.09■□□□□ 0.65
UBE2NP61088 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBE2NP61088 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
UBE2NP61088 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBE2NP61088 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
UBE2NP61088 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
UBE2NP61088 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms