Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 TIS11YLR136C 858 nt3.68□□□□□ -1.82
YNL040WP53960 MOH1YBL049W 417 nt3.68□□□□□ -1.82
YNL040WP53960 RNA1YMR235C 1224 nt3.68□□□□□ -1.82
YNL040WP53960 snR37snR37 386 nt3.68□□□□□ -1.82
YNL040WP53960 MRH4YGL064C 1686 nt3.68□□□□□ -1.82
YNL040WP53960 SMC3YJL074C 3693 nt3.67□□□□□ -1.82
YNL040WP53960 SYF1YDR416W 2580 nt3.67□□□□□ -1.82
YNL040WP53960 NPL4YBR170C 1743 nt3.67□□□□□ -1.82
YNL040WP53960 TSR1YDL060W 2367 nt3.67□□□□□ -1.82
YNL040WP53960 SWP82YFL049W 1872 nt3.67□□□□□ -1.82
YNL040WP53960 ALG11YNL048W 1647 nt3.67□□□□□ -1.82
YNL040WP53960 TDA1YMR291W 1761 nt3.67□□□□□ -1.82
YNL040WP53960 RTN1YDR233C 888 nt3.67□□□□□ -1.82
YNL040WP53960 BUR6YER159C 429 nt3.67□□□□□ -1.82
YNL040WP53960 YFR045WYFR045W 930 nt3.67□□□□□ -1.82
YNL040WP53960 YGR161W-CYGR161W-C 279 nt3.67□□□□□ -1.82
YNL040WP53960 YHL026CYHL026C 948 nt3.67□□□□□ -1.82
YNL040WP53960 YHR137C-AYHR137C-A 651 nt3.67□□□□□ -1.82
YNL040WP53960 SHH3YMR118C 591 nt3.67□□□□□ -1.82
YNL040WP53960 TIF34YMR146C 1044 nt3.67□□□□□ -1.82
YNL040WP53960 CKS1YBR135W 453 nt3.67□□□□□ -1.82
YNL040WP53960 NSP1YJL041W 2472 nt3.67□□□□□ -1.82
YNL040WP53960 PRP22YER013W 3438 nt3.67□□□□□ -1.82
YNL040WP53960 RTT109YLL002W 1311 nt3.67□□□□□ -1.82
YNL040WP53960 DAN4YJR151C 3486 nt3.67□□□□□ -1.82
YNL040WP53960 JEN1YKL217W 1851 nt3.67□□□□□ -1.82
YNL040WP53960 YBR137WYBR137W 540 nt3.66□□□□□ -1.82
YNL040WP53960 IOC4YMR044W 1428 nt3.66□□□□□ -1.82
YNL040WP53960 BMS1YPL217C 3552 nt3.66□□□□□ -1.82
YNL040WP53960 VPS53YJL029C 2469 nt3.66□□□□□ -1.82
YNL040WP53960 PUF2YPR042C 3228 nt3.66□□□□□ -1.82
YNL040WP53960 YDR098C-AYDR098C-A 1323 nt3.66□□□□□ -1.82
YNL040WP53960 YDR210C-CYDR210C-C 1323 nt3.66□□□□□ -1.82
YNL040WP53960 YDR261C-CYDR261C-C 1323 nt3.66□□□□□ -1.82
YNL040WP53960 YDR316W-AYDR316W-A 1323 nt3.66□□□□□ -1.82
YNL040WP53960 YDR365W-AYDR365W-A 1323 nt3.66□□□□□ -1.82
YNL040WP53960 YER137C-AYER137C-A 1323 nt3.66□□□□□ -1.82
YNL040WP53960 YER159C-AYER159C-A 1323 nt3.66□□□□□ -1.82
YNL040WP53960 YGR027W-AYGR027W-A 1323 nt3.66□□□□□ -1.82
YNL040WP53960 YGR038C-AYGR038C-A 1323 nt3.66□□□□□ -1.82
YNL040WP53960 YGR161C-CYGR161C-C 1323 nt3.66□□□□□ -1.82
YNL040WP53960 YJR026WYJR026W 1323 nt3.66□□□□□ -1.82
YNL040WP53960 YJR028WYJR028W 1323 nt3.66□□□□□ -1.82
YNL040WP53960 YAR010CYAR010C 1323 nt3.66□□□□□ -1.82
YNL040WP53960 YLR157C-AYLR157C-A 1323 nt3.66□□□□□ -1.82
YNL040WP53960 YLR227W-AYLR227W-A 1323 nt3.66□□□□□ -1.82
YNL040WP53960 YLR256W-AYLR256W-A 1323 nt3.66□□□□□ -1.82
YNL040WP53960 YML040WYML040W 1323 nt3.66□□□□□ -1.82
YNL040WP53960 YML045W-AYML045W-A 1323 nt3.66□□□□□ -1.82
YNL040WP53960 YMR051CYMR051C 1323 nt3.66□□□□□ -1.82
YNL040WP53960 YNL054W-AYNL054W-A 1323 nt3.66□□□□□ -1.82
YNL040WP53960 YOL103W-AYOL103W-A 1323 nt3.66□□□□□ -1.82
YNL040WP53960 YPL257W-AYPL257W-A 1323 nt3.66□□□□□ -1.82
YNL040WP53960 YPR137C-AYPR137C-A 1323 nt3.66□□□□□ -1.82
YNL040WP53960 YPR158C-CYPR158C-C 1323 nt3.66□□□□□ -1.82
YNL040WP53960 BCK2YER167W 2556 nt3.65□□□□□ -1.82
YNL040WP53960 UGA3YDL170W 1587 nt3.65□□□□□ -1.82
YNL040WP53960 UBP10YNL186W 2379 nt3.65□□□□□ -1.83
YNL040WP53960 YDR161WYDR161W 1164 nt3.65□□□□□ -1.83
YNL040WP53960 RPB7YDR404C 516 nt3.65□□□□□ -1.83
YNL040WP53960 YGL063C-AYGL063C-A 150 nt3.65□□□□□ -1.83
YNL040WP53960 SPT4YGR063C 309 nt3.65□□□□□ -1.83
YNL040WP53960 COX2Q0250 756 nt3.65□□□□□ -1.83
YNL040WP53960 CAP2YIL034C 864 nt3.65□□□□□ -1.83
YNL040WP53960 ANB1YJR047C 474 nt3.65□□□□□ -1.83
YNL040WP53960 WRS1YOL097C 1299 nt3.65□□□□□ -1.83
YNL040WP53960 YPL071CYPL071C 471 nt3.65□□□□□ -1.83
YNL040WP53960 SPO1YNL012W 1896 nt3.64□□□□□ -1.83
YNL040WP53960 URC2YDR520C 2319 nt3.64□□□□□ -1.83
YNL040WP53960 MBR1YKL093W 1020 nt3.64□□□□□ -1.83
YNL040WP53960 IMP1YMR150C 573 nt3.64□□□□□ -1.83
YNL040WP53960 ALE1YOR175C 1860 nt3.64□□□□□ -1.83
YNL040WP53960 NUP159YIL115C 4383 nt3.64□□□□□ -1.83
YNL040WP53960 FAA1YOR317W 2103 nt3.64□□□□□ -1.83
YNL040WP53960 RPS8BYER102W 603 nt3.63□□□□□ -1.83
YNL040WP53960 ENT3YJR125C 1227 nt3.63□□□□□ -1.83
YNL040WP53960 VPS71YML041C 843 nt3.63□□□□□ -1.83
YNL040WP53960 RAD14YMR201C 1116 nt3.63□□□□□ -1.83
YNL040WP53960 RPS8AYBL072C 603 nt3.63□□□□□ -1.83
YNL040WP53960 UBP6YFR010W 1500 nt3.63□□□□□ -1.83
YNL040WP53960 GPI13YLL031C 3054 nt3.63□□□□□ -1.83
YNL040WP53960 KIP3YGL216W 2418 nt3.63□□□□□ -1.83
YNL040WP53960 MPC54YOR177C 1395 nt3.63□□□□□ -1.83
YNL040WP53960 MSN4YKL062W 1893 nt3.62□□□□□ -1.83
YNL040WP53960 PRP11YDL043C 801 nt3.62□□□□□ -1.83
YNL040WP53960 PHO92YDR374C 921 nt3.62□□□□□ -1.83
YNL040WP53960 MRP13YGR084C 1020 nt3.62□□□□□ -1.83
YNL040WP53960 MYO3YKL129C 3819 nt3.62□□□□□ -1.83
YNL040WP53960 TIR2YOR010C 756 nt3.62□□□□□ -1.83
YNL040WP53960 YRB30YGL164C 1323 nt3.62□□□□□ -1.83
YNL040WP53960 MTC3YGL226W 372 nt3.61□□□□□ -1.83
YNL040WP53960 RAI1YGL246C 1164 nt3.61□□□□□ -1.83
YNL040WP53960 SDS3YIL084C 984 nt3.61□□□□□ -1.83
YNL040WP53960 YKL071WYKL071W 771 nt3.61□□□□□ -1.83
YNL040WP53960 RRP36YOR287C 903 nt3.61□□□□□ -1.83
YNL040WP53960 CTR1YPR124W 1221 nt3.61□□□□□ -1.83
YNL040WP53960 HPR1YDR138W 2259 nt3.61□□□□□ -1.83
YNL040WP53960 RPA14YDR156W 414 nt3.6□□□□□ -1.83
YNL040WP53960 SLX8YER116C 825 nt3.6□□□□□ -1.83
YNL040WP53960 ECM34YHL043W 513 nt3.6□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 30.2 ms