Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 GAS2L1P2-201ENST00000436355 1356 ntBASIC31.67■■■□□ 2.66
CLTCL1P53675 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC31.67■■■□□ 2.66
CLTCL1P53675 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
CLTCL1P53675 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC31.66■■■□□ 2.66
CLTCL1P53675 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CLTCL1P53675 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CLTCL1P53675 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CLTCL1P53675 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC31.66■■■□□ 2.66
CLTCL1P53675 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CLTCL1P53675 OXCT2P1-201ENST00000447263 1535 ntBASIC31.65■■■□□ 2.66
CLTCL1P53675 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
CLTCL1P53675 AC005224.4-201ENST00000583262 1652 ntBASIC31.65■■■□□ 2.66
CLTCL1P53675 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
CLTCL1P53675 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CLTCL1P53675 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC31.64■■■□□ 2.66
CLTCL1P53675 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CLTCL1P53675 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CLTCL1P53675 USP45-205ENST00000472914 1617 ntTSL 5 BASIC31.64■■■□□ 2.66
CLTCL1P53675 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CLTCL1P53675 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CLTCL1P53675 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
CLTCL1P53675 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
CLTCL1P53675 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
CLTCL1P53675 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC31.63■■■□□ 2.65
CLTCL1P53675 ANOS2P-203ENST00000472227 1816 ntBASIC31.63■■■□□ 2.65
CLTCL1P53675 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CLTCL1P53675 MIR663A-201ENST00000385250 93 ntBASIC31.63■■■□□ 2.65
CLTCL1P53675 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC31.63■■■□□ 2.65
CLTCL1P53675 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC31.63■■■□□ 2.65
CLTCL1P53675 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC31.63■■■□□ 2.65
CLTCL1P53675 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC31.63■■■□□ 2.65
CLTCL1P53675 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
CLTCL1P53675 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC31.62■■■□□ 2.65
CLTCL1P53675 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
CLTCL1P53675 KRT19P1-201ENST00000405746 1186 ntBASIC31.62■■■□□ 2.65
CLTCL1P53675 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
CLTCL1P53675 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC31.62■■■□□ 2.65
CLTCL1P53675 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC31.62■■■□□ 2.65
CLTCL1P53675 BID-214ENST00000617586 542 ntTSL 5 BASIC31.62■■■□□ 2.65
CLTCL1P53675 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CLTCL1P53675 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CLTCL1P53675 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC31.62■■■□□ 2.65
CLTCL1P53675 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
CLTCL1P53675 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CLTCL1P53675 ASL-203ENST00000380839 1765 ntTSL 5 BASIC31.61■■■□□ 2.65
CLTCL1P53675 CROCCP5-201ENST00000436658 830 ntBASIC31.61■■■□□ 2.65
CLTCL1P53675 AC079140.4-201ENST00000507448 529 ntBASIC31.61■■■□□ 2.65
CLTCL1P53675 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CLTCL1P53675 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC31.61■■■□□ 2.65
CLTCL1P53675 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC31.61■■■□□ 2.65
CLTCL1P53675 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC31.61■■■□□ 2.65
CLTCL1P53675 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
CLTCL1P53675 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC31.61■■■□□ 2.65
CLTCL1P53675 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC31.6■■■□□ 2.65
CLTCL1P53675 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC31.6■■■□□ 2.65
CLTCL1P53675 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC31.6■■■□□ 2.65
CLTCL1P53675 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
CLTCL1P53675 KRT87P-202ENST00000534226 1464 ntBASIC31.6■■■□□ 2.65
CLTCL1P53675 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CLTCL1P53675 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC31.6■■■□□ 2.65
CLTCL1P53675 MFSD11-216ENST00000590393 1141 ntBASIC31.6■■■□□ 2.65
CLTCL1P53675 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC31.6■■■□□ 2.65
CLTCL1P53675 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
CLTCL1P53675 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC31.59■■■□□ 2.65
CLTCL1P53675 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CLTCL1P53675 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CLTCL1P53675 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CLTCL1P53675 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC31.59■■■□□ 2.65
CLTCL1P53675 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CLTCL1P53675 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
CLTCL1P53675 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CLTCL1P53675 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CLTCL1P53675 AC026185.1-201ENST00000445748 174 ntBASIC31.58■■■□□ 2.65
CLTCL1P53675 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC31.58■■■□□ 2.65
CLTCL1P53675 AC104771.1-201ENST00000603335 964 ntBASIC31.58■■■□□ 2.65
CLTCL1P53675 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC31.58■■■□□ 2.65
CLTCL1P53675 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CLTCL1P53675 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CLTCL1P53675 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CLTCL1P53675 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CLTCL1P53675 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
CLTCL1P53675 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CLTCL1P53675 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
CLTCL1P53675 GXYLT1P5-201ENST00000614548 1189 ntBASIC31.57■■■□□ 2.64
CLTCL1P53675 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CLTCL1P53675 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CLTCL1P53675 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CLTCL1P53675 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
CLTCL1P53675 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CLTCL1P53675 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CLTCL1P53675 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CLTCL1P53675 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CLTCL1P53675 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
CLTCL1P53675 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
CLTCL1P53675 PXK-203ENST00000383715 1756 ntTSL 5 BASIC31.54■■■□□ 2.64
CLTCL1P53675 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CLTCL1P53675 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CLTCL1P53675 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CLTCL1P53675 PPP1R14BP3-201ENST00000509033 445 ntBASIC31.54■■■□□ 2.64
CLTCL1P53675 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC31.54■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms