Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PDX1P52945 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.22■□□□□ 0.99
PDX1P52945 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDX1P52945 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDX1P52945 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.22■□□□□ 0.99
PDX1P52945 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDX1P52945 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
PDX1P52945 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PDX1P52945 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDX1P52945 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDX1P52945 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PDX1P52945 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDX1P52945 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.21■□□□□ 0.99
PDX1P52945 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.21■□□□□ 0.99
PDX1P52945 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
PDX1P52945 TPRG1LP1-201ENST00000598702 760 ntBASIC21.21■□□□□ 0.99
PDX1P52945 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDX1P52945 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PDX1P52945 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDX1P52945 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.2■□□□□ 0.99
PDX1P52945 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
PDX1P52945 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.2■□□□□ 0.98
PDX1P52945 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDX1P52945 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDX1P52945 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDX1P52945 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.2■□□□□ 0.98
PDX1P52945 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.2■□□□□ 0.98
PDX1P52945 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.2■□□□□ 0.98
PDX1P52945 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.2■□□□□ 0.98
PDX1P52945 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.2■□□□□ 0.98
PDX1P52945 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.2■□□□□ 0.98
PDX1P52945 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDX1P52945 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDX1P52945 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDX1P52945 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDX1P52945 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PDX1P52945 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDX1P52945 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PDX1P52945 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDX1P52945 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.19■□□□□ 0.98
PDX1P52945 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.19■□□□□ 0.98
PDX1P52945 AC006015.1-201ENST00000429970 570 ntBASIC21.19■□□□□ 0.98
PDX1P52945 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.19■□□□□ 0.98
PDX1P52945 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.19■□□□□ 0.98
PDX1P52945 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDX1P52945 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.19■□□□□ 0.98
PDX1P52945 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDX1P52945 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PDX1P52945 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PDX1P52945 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDX1P52945 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDX1P52945 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDX1P52945 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
PDX1P52945 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.18■□□□□ 0.98
PDX1P52945 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.18■□□□□ 0.98
PDX1P52945 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PDX1P52945 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.18■□□□□ 0.98
PDX1P52945 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDX1P52945 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDX1P52945 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.17■□□□□ 0.98
PDX1P52945 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDX1P52945 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.17■□□□□ 0.98
PDX1P52945 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDX1P52945 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.17■□□□□ 0.98
PDX1P52945 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.17■□□□□ 0.98
PDX1P52945 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDX1P52945 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.17■□□□□ 0.98
PDX1P52945 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDX1P52945 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDX1P52945 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDX1P52945 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDX1P52945 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDX1P52945 DUSP8P5-201ENST00000422884 1815 ntBASIC21.16■□□□□ 0.98
PDX1P52945 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.16■□□□□ 0.98
PDX1P52945 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDX1P52945 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.16■□□□□ 0.98
PDX1P52945 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.16■□□□□ 0.98
PDX1P52945 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.16■□□□□ 0.98
PDX1P52945 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PDX1P52945 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDX1P52945 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDX1P52945 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDX1P52945 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.15■□□□□ 0.98
PDX1P52945 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.15■□□□□ 0.98
PDX1P52945 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.15■□□□□ 0.98
PDX1P52945 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDX1P52945 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.15■□□□□ 0.98
PDX1P52945 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDX1P52945 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.15■□□□□ 0.98
PDX1P52945 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.15■□□□□ 0.98
PDX1P52945 HLA-L-209ENST00000420110 1011 ntBASIC21.15■□□□□ 0.98
PDX1P52945 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.15■□□□□ 0.98
PDX1P52945 RAP2CP1-201ENST00000605103 478 ntBASIC21.15■□□□□ 0.98
PDX1P52945 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.15■□□□□ 0.98
PDX1P52945 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDX1P52945 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PDX1P52945 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PDX1P52945 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDX1P52945 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDX1P52945 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms