Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CENPAP49450 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CENPAP49450 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CENPAP49450 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.66■□□□□ 0.74
CENPAP49450 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.66■□□□□ 0.74
CENPAP49450 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CENPAP49450 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CENPAP49450 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CENPAP49450 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CENPAP49450 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CENPAP49450 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CENPAP49450 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.66■□□□□ 0.74
CENPAP49450 AC009102.2-201ENST00000606772 1639 ntBASIC19.65■□□□□ 0.74
CENPAP49450 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CENPAP49450 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CENPAP49450 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CENPAP49450 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.65■□□□□ 0.74
CENPAP49450 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.65■□□□□ 0.74
CENPAP49450 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CENPAP49450 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CENPAP49450 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CENPAP49450 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CENPAP49450 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CENPAP49450 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.65■□□□□ 0.74
CENPAP49450 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CENPAP49450 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CENPAP49450 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CENPAP49450 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CENPAP49450 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CENPAP49450 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CENPAP49450 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CENPAP49450 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CENPAP49450 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CENPAP49450 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CENPAP49450 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CENPAP49450 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CENPAP49450 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CENPAP49450 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CENPAP49450 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CENPAP49450 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CENPAP49450 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.63■□□□□ 0.73
CENPAP49450 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CENPAP49450 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CENPAP49450 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CENPAP49450 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.63■□□□□ 0.73
CENPAP49450 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CENPAP49450 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CENPAP49450 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CENPAP49450 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CENPAP49450 LINC00565-201ENST00000562710 2331 ntBASIC19.63■□□□□ 0.73
CENPAP49450 AC137767.1-201ENST00000602918 1920 ntBASIC19.63■□□□□ 0.73
CENPAP49450 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CENPAP49450 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CENPAP49450 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.62■□□□□ 0.73
CENPAP49450 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CENPAP49450 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CENPAP49450 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.62■□□□□ 0.73
CENPAP49450 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CENPAP49450 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CENPAP49450 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CENPAP49450 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
CENPAP49450 AC092053.2-201ENST00000640557 1818 ntBASIC19.62■□□□□ 0.73
CENPAP49450 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CENPAP49450 CLDN5-201ENST00000403084 2357 ntBASIC19.62■□□□□ 0.73
CENPAP49450 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.62■□□□□ 0.73
CENPAP49450 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CENPAP49450 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CENPAP49450 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
CENPAP49450 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CENPAP49450 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.61■□□□□ 0.73
CENPAP49450 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CENPAP49450 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.61■□□□□ 0.73
CENPAP49450 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.61■□□□□ 0.73
CENPAP49450 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CENPAP49450 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CENPAP49450 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CENPAP49450 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
CENPAP49450 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.61■□□□□ 0.73
CENPAP49450 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CENPAP49450 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CENPAP49450 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CENPAP49450 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CENPAP49450 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CENPAP49450 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CENPAP49450 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
CENPAP49450 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CENPAP49450 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CENPAP49450 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CENPAP49450 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CENPAP49450 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.6■□□□□ 0.73
CENPAP49450 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CENPAP49450 UNC93B8-201ENST00000511903 705 ntBASIC19.6■□□□□ 0.73
CENPAP49450 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CENPAP49450 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CENPAP49450 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CENPAP49450 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CENPAP49450 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CENPAP49450 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CENPAP49450 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CENPAP49450 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms