Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 RUF21RUF21 707 nt4.27□□□□□ -1.73
UPF3P48412 YPT53YNL093W 663 nt4.27□□□□□ -1.73
UPF3P48412 HSH49YOR319W 642 nt4.27□□□□□ -1.73
UPF3P48412 SPO19YPL130W 672 nt4.27□□□□□ -1.73
UPF3P48412 ARA1YBR149W 1035 nt4.27□□□□□ -1.73
UPF3P48412 XKS1YGR194C 1803 nt4.27□□□□□ -1.73
UPF3P48412 YEH2YLR020C 1617 nt4.27□□□□□ -1.73
UPF3P48412 RPN4YDL020C 1596 nt4.27□□□□□ -1.73
UPF3P48412 RPL35BYDL136W 363 nt4.26□□□□□ -1.73
UPF3P48412 PAD1YDR538W 729 nt4.26□□□□□ -1.73
UPF3P48412 BUD13YGL174W 801 nt4.26□□□□□ -1.73
UPF3P48412 YGL188CYGL188C 174 nt4.26□□□□□ -1.73
UPF3P48412 YGR168CYGR168C 1131 nt4.26□□□□□ -1.73
UPF3P48412 YHL034W-AYHL034W-A 462 nt4.26□□□□□ -1.73
UPF3P48412 FLC1YPL221W 2382 nt4.26□□□□□ -1.73
UPF3P48412 MTH1YDR277C 1302 nt4.25□□□□□ -1.73
UPF3P48412 YDR056CYDR056C 618 nt4.25□□□□□ -1.73
UPF3P48412 DPB4YDR121W 591 nt4.25□□□□□ -1.73
UPF3P48412 YER145C-AYER145C-A 438 nt4.25□□□□□ -1.73
UPF3P48412 COX4YGL187C 468 nt4.25□□□□□ -1.73
UPF3P48412 TYS1YGR185C 1185 nt4.25□□□□□ -1.73
UPF3P48412 YIL165CYIL165C 360 nt4.25□□□□□ -1.73
UPF3P48412 YIL171W-AYIL171W-A 453 nt4.25□□□□□ -1.73
UPF3P48412 AIM21YIR003W 2040 nt4.25□□□□□ -1.73
UPF3P48412 YJL220WYJL220W 453 nt4.25□□□□□ -1.73
UPF3P48412 RRG9YNL213C 645 nt4.25□□□□□ -1.73
UPF3P48412 ACA1YER045C 1470 nt4.24□□□□□ -1.73
UPF3P48412 PMC1YGL006W 3522 nt4.24□□□□□ -1.73
UPF3P48412 ARI1YGL157W 1044 nt4.24□□□□□ -1.73
UPF3P48412 YPT35YHR105W 645 nt4.24□□□□□ -1.73
UPF3P48412 DCG1YIR030C 735 nt4.24□□□□□ -1.73
UPF3P48412 CDC42YLR229C 576 nt4.24□□□□□ -1.73
UPF3P48412 MED11YMR112C 396 nt4.24□□□□□ -1.73
UPF3P48412 YOL118CYOL118C 309 nt4.24□□□□□ -1.73
UPF3P48412 RPS11BYBR048W 471 nt4.24□□□□□ -1.73
UPF3P48412 POP4YBR257W 840 nt4.24□□□□□ -1.73
UPF3P48412 MAL12YGR292W 1755 nt4.24□□□□□ -1.73
UPF3P48412 MAL32YBR299W 1755 nt4.24□□□□□ -1.73
UPF3P48412 YIG1YPL201C 1386 nt4.24□□□□□ -1.73
UPF3P48412 YOR365CYOR365C 2112 nt4.24□□□□□ -1.73
UPF3P48412 OSH2YDL019C 3852 nt4.23□□□□□ -1.73
UPF3P48412 SDS23YGL056C 1584 nt4.23□□□□□ -1.73
UPF3P48412 TRP4YDR354W 1143 nt4.23□□□□□ -1.73
UPF3P48412 SPR6YER115C 576 nt4.23□□□□□ -1.73
UPF3P48412 BNA6YFR047C 888 nt4.23□□□□□ -1.73
UPF3P48412 YHR022CYHR022C 771 nt4.23□□□□□ -1.73
UPF3P48412 YHR112CYHR112C 1137 nt4.23□□□□□ -1.73
UPF3P48412 SAW1YAL027W 786 nt4.23□□□□□ -1.73
UPF3P48412 SED5YLR026C 1023 nt4.23□□□□□ -1.73
UPF3P48412 GPI12YMR281W 915 nt4.23□□□□□ -1.73
UPF3P48412 VAM3YOR106W 852 nt4.23□□□□□ -1.73
UPF3P48412 ATG29YPL166W 642 nt4.23□□□□□ -1.73
UPF3P48412 OXR1YPL196W 822 nt4.23□□□□□ -1.73
UPF3P48412 YPR074W-AYPR074W-A 171 nt4.23□□□□□ -1.73
UPF3P48412 SUA7YPR086W 1038 nt4.23□□□□□ -1.73
UPF3P48412 NUF2YOL069W 1356 nt4.23□□□□□ -1.73
UPF3P48412 YSH1YLR277C 2340 nt4.23□□□□□ -1.73
UPF3P48412 VAC7YNL054W 3498 nt4.23□□□□□ -1.73
UPF3P48412 YCR023CYCR023C 1836 nt4.23□□□□□ -1.73
UPF3P48412 APN2YBL019W 1563 nt4.23□□□□□ -1.73
UPF3P48412 SAF1YBR280C 1914 nt4.23□□□□□ -1.73
UPF3P48412 MNN4YKL201C 3537 nt4.22□□□□□ -1.73
UPF3P48412 BRE4YDL231C 3378 nt4.22□□□□□ -1.73
UPF3P48412 MSS4YDR208W 2340 nt4.22□□□□□ -1.73
UPF3P48412 TAF8YML114C 1533 nt4.22□□□□□ -1.73
UPF3P48412 RPG1YBR079C 2895 nt4.22□□□□□ -1.73
UPF3P48412 DSN1YIR010W 1731 nt4.22□□□□□ -1.73
UPF3P48412 YOS1YER074W-A 258 nt4.22□□□□□ -1.73
UPF3P48412 ISC10YER180C 804 nt4.22□□□□□ -1.73
UPF3P48412 AIM22YJL046W 1230 nt4.22□□□□□ -1.73
UPF3P48412 FIP1YJR093C 984 nt4.22□□□□□ -1.73
UPF3P48412 UBI4YLL039C 1146 nt4.22□□□□□ -1.73
UPF3P48412 USB1YLR132C 873 nt4.22□□□□□ -1.73
UPF3P48412 RPP0YLR340W 939 nt4.22□□□□□ -1.73
UPF3P48412 YNL171CYNL171C 369 nt4.22□□□□□ -1.73
UPF3P48412 CIN5YOR028C 888 nt4.22□□□□□ -1.73
UPF3P48412 ECM23YPL021W 564 nt4.22□□□□□ -1.73
UPF3P48412 ICY2YPL250C 411 nt4.22□□□□□ -1.73
UPF3P48412 FRM2YCL026C-A 582 nt4.22□□□□□ -1.73
UPF3P48412 UBP12YJL197W 3765 nt4.22□□□□□ -1.73
UPF3P48412 CMK1YFR014C 1341 nt4.21□□□□□ -1.73
UPF3P48412 RAD52YML032C 1416 nt4.21□□□□□ -1.73
UPF3P48412 SEG1YMR086W 2883 nt4.21□□□□□ -1.73
UPF3P48412 SEN1YLR430W 6696 nt4.21□□□□□ -1.74
UPF3P48412 GVP36YIL041W 981 nt4.21□□□□□ -1.74
UPF3P48412 YJL218WYJL218W 591 nt4.21□□□□□ -1.74
UPF3P48412 BAT2YJR148W 1131 nt4.21□□□□□ -1.74
UPF3P48412 YML090WYML090W 387 nt4.21□□□□□ -1.74
UPF3P48412 DDP1YOR163W 567 nt4.21□□□□□ -1.74
UPF3P48412 YOR263CYOR263C 408 nt4.21□□□□□ -1.74
UPF3P48412 CAF20YOR276W 486 nt4.21□□□□□ -1.74
UPF3P48412 YPL025CYPL025C 558 nt4.21□□□□□ -1.74
UPF3P48412 HOYDL227C 1761 nt4.21□□□□□ -1.74
UPF3P48412 FAS2YPL231W 5664 nt4.21□□□□□ -1.74
UPF3P48412 YOL153CYOL153C 1746 nt4.21□□□□□ -1.74
UPF3P48412 CTM1YHR109W 1758 nt4.2□□□□□ -1.74
UPF3P48412 PEX30YLR324W 1572 nt4.2□□□□□ -1.74
UPF3P48412 BUD26YDR241W 288 nt4.2□□□□□ -1.74
UPF3P48412 LOH1YJL038C 660 nt4.2□□□□□ -1.74
UPF3P48412 ARG3YJL088W 1017 nt4.2□□□□□ -1.74
Retrieved 100 of 7,029 protein–RNA pairs in 14.6 ms