Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeastyeast

Known RBP Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM5P40089 RFM1YOR279C 933 nt4.13□□□□□ -1.75
LSM5P40089 POP4YBR257W 840 nt4.13□□□□□ -1.75
LSM5P40089 PST1YDR055W 1335 nt4.13□□□□□ -1.75
LSM5P40089 PCL2YDL127W 927 nt4.12□□□□□ -1.75
LSM5P40089 YJL218WYJL218W 591 nt4.12□□□□□ -1.75
LSM5P40089 LAC1YKL008C 1257 nt4.12□□□□□ -1.75
LSM5P40089 YLR407WYLR407W 687 nt4.12□□□□□ -1.75
LSM5P40089 YOL166CYOL166C 339 nt4.12□□□□□ -1.75
LSM5P40089 CYC2YOR037W 1101 nt4.12□□□□□ -1.75
LSM5P40089 TMC1YOR052C 453 nt4.12□□□□□ -1.75
LSM5P40089 VPS69YPR087W 321 nt4.12□□□□□ -1.75
LSM5P40089 HPA2YPR193C 471 nt4.12□□□□□ -1.75
LSM5P40089 TPD3YAL016W 1908 nt4.12□□□□□ -1.75
LSM5P40089 FAS2YPL231W 5664 nt4.12□□□□□ -1.75
LSM5P40089 DHR2YKL078W 2208 nt4.11□□□□□ -1.75
LSM5P40089 UBP12YJL197W 3765 nt4.11□□□□□ -1.75
LSM5P40089 FUN12YAL035W 3009 nt4.11□□□□□ -1.75
LSM5P40089 FDC1YDR539W 1512 nt4.11□□□□□ -1.75
LSM5P40089 KIP3YGL216W 2418 nt4.11□□□□□ -1.75
LSM5P40089 YCR015CYCR015C 954 nt4.11□□□□□ -1.75
LSM5P40089 AIM6YDL237W 1173 nt4.11□□□□□ -1.75
LSM5P40089 YHL034W-AYHL034W-A 462 nt4.11□□□□□ -1.75
LSM5P40089 YIL014C-AYIL014C-A 315 nt4.11□□□□□ -1.75
LSM5P40089 YIR018C-AYIR018C-A 138 nt4.11□□□□□ -1.75
LSM5P40089 AAH1YNL141W 1044 nt4.11□□□□□ -1.75
LSM5P40089 YNL162W-AYNL162W-A 219 nt4.11□□□□□ -1.75
LSM5P40089 MDJ2YNL328C 441 nt4.11□□□□□ -1.75
LSM5P40089 YOR131CYOR131C 657 nt4.11□□□□□ -1.75
LSM5P40089 DDP1YOR163W 567 nt4.11□□□□□ -1.75
LSM5P40089 YCL001W-AYCL001W-A 462 nt4.11□□□□□ -1.75
LSM5P40089 KTR6YPL053C 1341 nt4.11□□□□□ -1.75
LSM5P40089 XKS1YGR194C 1803 nt4.11□□□□□ -1.75
LSM5P40089 DIT2YDR402C 1470 nt4.11□□□□□ -1.75
LSM5P40089 PEP5YMR231W 3090 nt4.1□□□□□ -1.75
LSM5P40089 VAC7YNL054W 3498 nt4.1□□□□□ -1.75
LSM5P40089 AEP3YPL005W 1821 nt4.1□□□□□ -1.75
LSM5P40089 YDL186WYDL186W 834 nt4.1□□□□□ -1.75
LSM5P40089 UBC8YEL012W 657 nt4.1□□□□□ -1.75
LSM5P40089 YGL258W-AYGL258W-A 234 nt4.1□□□□□ -1.75
LSM5P40089 MRPL3YMR024W 1173 nt4.1□□□□□ -1.75
LSM5P40089 YMR178WYMR178W 825 nt4.1□□□□□ -1.75
LSM5P40089 MTH1YDR277C 1302 nt4.1□□□□□ -1.75
LSM5P40089 PGS1YCL004W 1566 nt4.1□□□□□ -1.75
LSM5P40089 TCO89YPL180W 2400 nt4.1□□□□□ -1.75
LSM5P40089 SNF2YOR290C 5112 nt4.09□□□□□ -1.75
LSM5P40089 POL1YNL102W 4407 nt4.09□□□□□ -1.75
LSM5P40089 KIC1YHR102W 3243 nt4.09□□□□□ -1.75
LSM5P40089 YDR056CYDR056C 618 nt4.09□□□□□ -1.75
LSM5P40089 BCP1YDR361C 852 nt4.09□□□□□ -1.75
LSM5P40089 API2YDR525W 330 nt4.09□□□□□ -1.75
LSM5P40089 TFA2YKR062W 987 nt4.09□□□□□ -1.75
LSM5P40089 SUA7YPR086W 1038 nt4.09□□□□□ -1.75
LSM5P40089 YBR103C-AYBR103C-A 144 nt4.09□□□□□ -1.75
LSM5P40089 SPT16YGL207W 3108 nt4.09□□□□□ -1.75
LSM5P40089 TMA17YDL110C 453 nt4.08□□□□□ -1.76
LSM5P40089 DPB4YDR121W 591 nt4.08□□□□□ -1.76
LSM5P40089 PRP28YDR243C 1767 nt4.08□□□□□ -1.76
LSM5P40089 YDR246W-AYDR246W-A 201 nt4.08□□□□□ -1.76
LSM5P40089 BSC2YDR275W 708 nt4.08□□□□□ -1.76
LSM5P40089 YEL074WYEL074W 339 nt4.08□□□□□ -1.76
LSM5P40089 BUD25YER014C-A 462 nt4.08□□□□□ -1.76
LSM5P40089 YGR026WYGR026W 837 nt4.08□□□□□ -1.76
LSM5P40089 tQ(UUG)CtQ(UUG)C 72 nt4.08□□□□□ -1.76
LSM5P40089 tQ(UUG)D1tQ(UUG)D1 72 nt4.08□□□□□ -1.76
LSM5P40089 tQ(UUG)D2tQ(UUG)D2 72 nt4.08□□□□□ -1.76
LSM5P40089 tQ(UUG)D3tQ(UUG)D3 72 nt4.08□□□□□ -1.76
LSM5P40089 tQ(UUG)E1tQ(UUG)E1 72 nt4.08□□□□□ -1.76
LSM5P40089 tQ(UUG)HtQ(UUG)H 72 nt4.08□□□□□ -1.76
LSM5P40089 tQ(UUG)LtQ(UUG)L 72 nt4.08□□□□□ -1.76
LSM5P40089 EFB1YAL003W 621 nt4.08□□□□□ -1.76
LSM5P40089 RDN5-1RDN5-1 121 nt4.08□□□□□ -1.76
LSM5P40089 LAS1YKR063C 1509 nt4.08□□□□□ -1.76
LSM5P40089 RDN5-6RDN5-6 121 nt4.08□□□□□ -1.76
LSM5P40089 SSO2YMR183C 888 nt4.08□□□□□ -1.76
LSM5P40089 RIM21YNL294C 1602 nt4.08□□□□□ -1.76
LSM5P40089 MUM2YBR057C 1101 nt4.08□□□□□ -1.76
LSM5P40089 MTR10YOR160W 2919 nt4.08□□□□□ -1.76
LSM5P40089 CAF130YGR134W 3369 nt4.07□□□□□ -1.76
LSM5P40089 TRM12YML005W 1389 nt4.07□□□□□ -1.76
LSM5P40089 SOL3YHR163W 750 nt4.07□□□□□ -1.76
LSM5P40089 YMR085WYMR085W 1299 nt4.07□□□□□ -1.76
LSM5P40089 HSH49YOR319W 642 nt4.07□□□□□ -1.76
LSM5P40089 RPS11BYBR048W 471 nt4.07□□□□□ -1.76
LSM5P40089 EFM2YBR271W 1260 nt4.07□□□□□ -1.76
LSM5P40089 RPG1YBR079C 2895 nt4.07□□□□□ -1.76
LSM5P40089 YPK9YOR291W 4419 nt4.07□□□□□ -1.76
LSM5P40089 DSN1YIR010W 1731 nt4.07□□□□□ -1.76
LSM5P40089 CYM1YDR430C 2970 nt4.06□□□□□ -1.76
LSM5P40089 YIG1YPL201C 1386 nt4.06□□□□□ -1.76
LSM5P40089 TRM11YOL124C 1302 nt4.06□□□□□ -1.76
LSM5P40089 RPL8AYHL033C 771 nt4.06□□□□□ -1.76
LSM5P40089 EBP2YKL172W 1284 nt4.06□□□□□ -1.76
LSM5P40089 RUF20RUF20 443 nt4.06□□□□□ -1.76
LSM5P40089 RPL18BYNL301C 561 nt4.06□□□□□ -1.76
LSM5P40089 MDM12YOL009C 816 nt4.06□□□□□ -1.76
LSM5P40089 RPL18AYOL120C 561 nt4.06□□□□□ -1.76
LSM5P40089 DSS4YPR017C 432 nt4.06□□□□□ -1.76
LSM5P40089 DAP2YHR028C 2457 nt4.06□□□□□ -1.76
LSM5P40089 YRM1YOR172W 2361 nt4.06□□□□□ -1.76
LSM5P40089 PHO84YML123C 1764 nt4.06□□□□□ -1.76
Retrieved 100 of 7,029 protein–RNA pairs in 34.7 ms