Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AL359736.2-201ENST00000621992 437 ntBASIC29.22■■■□□ 2.27
RXRBP28702 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
RXRBP28702 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
RXRBP28702 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
RXRBP28702 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC29.21■■■□□ 2.27
RXRBP28702 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
RXRBP28702 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
RXRBP28702 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
RXRBP28702 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
RXRBP28702 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
RXRBP28702 AC068338.2-201ENST00000563278 1430 ntBASIC29.2■■■□□ 2.27
RXRBP28702 EI24-204ENST00000527235 1625 ntTSL 5 BASIC29.2■■■□□ 2.27
RXRBP28702 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC29.2■■■□□ 2.26
RXRBP28702 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.26
RXRBP28702 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC29.2■■■□□ 2.26
RXRBP28702 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC29.2■■■□□ 2.26
RXRBP28702 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
RXRBP28702 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC29.19■■■□□ 2.26
RXRBP28702 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
RXRBP28702 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
RXRBP28702 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
RXRBP28702 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC29.19■■■□□ 2.26
RXRBP28702 OR10C1-204ENST00000622521 1039 ntBASIC29.19■■■□□ 2.26
RXRBP28702 AC013268.1-206ENST00000638368 961 ntBASIC29.19■■■□□ 2.26
RXRBP28702 AC112229.1-201ENST00000639295 961 ntBASIC29.19■■■□□ 2.26
RXRBP28702 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC29.19■■■□□ 2.26
RXRBP28702 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
RXRBP28702 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
RXRBP28702 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC29.19■■■□□ 2.26
RXRBP28702 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC29.18■■■□□ 2.26
RXRBP28702 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC29.18■■■□□ 2.26
RXRBP28702 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
RXRBP28702 BX276092.2-201ENST00000417668 665 ntBASIC29.18■■■□□ 2.26
RXRBP28702 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC29.18■■■□□ 2.26
RXRBP28702 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC29.18■■■□□ 2.26
RXRBP28702 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC29.18■■■□□ 2.26
RXRBP28702 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC29.18■■■□□ 2.26
RXRBP28702 AC068587.7-201ENST00000641602 218 ntBASIC29.18■■■□□ 2.26
RXRBP28702 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
RXRBP28702 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC29.18■■■□□ 2.26
RXRBP28702 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC29.18■■■□□ 2.26
RXRBP28702 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC29.18■■■□□ 2.26
RXRBP28702 AC010501.1-201ENST00000606270 1962 ntBASIC29.17■■■□□ 2.26
RXRBP28702 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
RXRBP28702 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
RXRBP28702 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC29.17■■■□□ 2.26
RXRBP28702 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC29.17■■■□□ 2.26
RXRBP28702 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC29.17■■■□□ 2.26
RXRBP28702 INO80E-214ENST00000620599 515 ntTSL 2 BASIC29.17■■■□□ 2.26
RXRBP28702 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC29.17■■■□□ 2.26
RXRBP28702 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC29.17■■■□□ 2.26
RXRBP28702 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC29.17■■■□□ 2.26
RXRBP28702 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
RXRBP28702 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
RXRBP28702 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
RXRBP28702 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
RXRBP28702 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
RXRBP28702 AC093787.1-201ENST00000450396 207 ntBASIC29.16■■■□□ 2.26
RXRBP28702 BET1L-207ENST00000529614 560 ntTSL 5 BASIC29.16■■■□□ 2.26
RXRBP28702 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
RXRBP28702 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
RXRBP28702 ASL-203ENST00000380839 1765 ntTSL 5 BASIC29.16■■■□□ 2.26
RXRBP28702 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC29.15■■■□□ 2.26
RXRBP28702 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
RXRBP28702 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
RXRBP28702 BMP1-204ENST00000397814 836 ntTSL 4 BASIC29.15■■■□□ 2.26
RXRBP28702 AL512625.2-201ENST00000417533 625 ntBASIC29.15■■■□□ 2.26
RXRBP28702 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC29.15■■■□□ 2.26
RXRBP28702 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
RXRBP28702 SLC6A10P-202ENST00000431994 2058 ntBASIC29.15■■■□□ 2.26
RXRBP28702 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
RXRBP28702 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC29.15■■■□□ 2.26
RXRBP28702 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
RXRBP28702 LINC01529-204ENST00000636474 1715 ntBASIC29.14■■■□□ 2.26
RXRBP28702 LSR-205ENST00000427250 1606 ntTSL 2 BASIC29.14■■■□□ 2.26
RXRBP28702 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
RXRBP28702 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.26
RXRBP28702 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC29.14■■■□□ 2.26
RXRBP28702 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC29.14■■■□□ 2.26
RXRBP28702 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
RXRBP28702 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.14■■■□□ 2.26
RXRBP28702 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
RXRBP28702 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
RXRBP28702 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
RXRBP28702 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
RXRBP28702 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
RXRBP28702 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC29.13■■■□□ 2.25
RXRBP28702 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC29.13■■■□□ 2.25
RXRBP28702 SNORA78-201ENST00000459373 127 ntBASIC29.13■■■□□ 2.25
RXRBP28702 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC29.13■■■□□ 2.25
RXRBP28702 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC29.13■■■□□ 2.25
RXRBP28702 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
RXRBP28702 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
RXRBP28702 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
RXRBP28702 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
RXRBP28702 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC29.12■■■□□ 2.25
RXRBP28702 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC29.12■■■□□ 2.25
RXRBP28702 AC005224.4-201ENST00000583262 1652 ntBASIC29.12■■■□□ 2.25
RXRBP28702 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC29.12■■■□□ 2.25
RXRBP28702 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms