Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.78■□□□□ 0.92
CCL4P13236 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.78■□□□□ 0.92
CCL4P13236 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.78■□□□□ 0.92
CCL4P13236 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCL4P13236 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCL4P13236 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCL4P13236 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCL4P13236 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCL4P13236 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCL4P13236 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.77■□□□□ 0.92
CCL4P13236 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.77■□□□□ 0.92
CCL4P13236 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.77■□□□□ 0.92
CCL4P13236 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.77■□□□□ 0.92
CCL4P13236 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.77■□□□□ 0.92
CCL4P13236 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCL4P13236 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CCL4P13236 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.77■□□□□ 0.91
CCL4P13236 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.77■□□□□ 0.91
CCL4P13236 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.76■□□□□ 0.91
CCL4P13236 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCL4P13236 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.76■□□□□ 0.91
CCL4P13236 AC026185.1-201ENST00000445748 174 ntBASIC20.76■□□□□ 0.91
CCL4P13236 AC079140.4-201ENST00000507448 529 ntBASIC20.76■□□□□ 0.91
CCL4P13236 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.76■□□□□ 0.91
CCL4P13236 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCL4P13236 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.76■□□□□ 0.91
CCL4P13236 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCL4P13236 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.75■□□□□ 0.91
CCL4P13236 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CCL4P13236 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CCL4P13236 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCL4P13236 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCL4P13236 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.75■□□□□ 0.91
CCL4P13236 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCL4P13236 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCL4P13236 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCL4P13236 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCL4P13236 DUSP8P3-201ENST00000399571 1760 ntBASIC20.74■□□□□ 0.91
CCL4P13236 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.74■□□□□ 0.91
CCL4P13236 ESRRAP2-201ENST00000418437 1549 ntBASIC20.74■□□□□ 0.91
CCL4P13236 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCL4P13236 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCL4P13236 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.74■□□□□ 0.91
CCL4P13236 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCL4P13236 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.74■□□□□ 0.91
CCL4P13236 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCL4P13236 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCL4P13236 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCL4P13236 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCL4P13236 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCL4P13236 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
CCL4P13236 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCL4P13236 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.73■□□□□ 0.91
CCL4P13236 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.73■□□□□ 0.91
CCL4P13236 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CCL4P13236 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCL4P13236 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCL4P13236 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCL4P13236 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCL4P13236 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.72■□□□□ 0.91
CCL4P13236 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCL4P13236 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCL4P13236 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
CCL4P13236 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.72■□□□□ 0.91
CCL4P13236 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.72■□□□□ 0.91
CCL4P13236 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.72■□□□□ 0.91
CCL4P13236 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCL4P13236 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCL4P13236 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CCL4P13236 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCL4P13236 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.72■□□□□ 0.91
CCL4P13236 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.72■□□□□ 0.91
CCL4P13236 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCL4P13236 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.71■□□□□ 0.91
CCL4P13236 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCL4P13236 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.71■□□□□ 0.91
CCL4P13236 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.71■□□□□ 0.91
CCL4P13236 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCL4P13236 CROCCP5-201ENST00000436658 830 ntBASIC20.71■□□□□ 0.91
CCL4P13236 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCL4P13236 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCL4P13236 AC011767.1-201ENST00000617410 1153 ntBASIC20.71■□□□□ 0.91
CCL4P13236 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.71■□□□□ 0.91
CCL4P13236 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CCL4P13236 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCL4P13236 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCL4P13236 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCL4P13236 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
CCL4P13236 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCL4P13236 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CCL4P13236 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CCL4P13236 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCL4P13236 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCL4P13236 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.7■□□□□ 0.9
CCL4P13236 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.7■□□□□ 0.9
CCL4P13236 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCL4P13236 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.7■□□□□ 0.9
CCL4P13236 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCL4P13236 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.7■□□□□ 0.9
CCL4P13236 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms