Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
UBL4AP11441 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBL4AP11441 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
UBL4AP11441 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBL4AP11441 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBL4AP11441 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBL4AP11441 AC127496.7-201ENST00000625110 1798 ntBASIC20.11■□□□□ 0.81
UBL4AP11441 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.11■□□□□ 0.81
UBL4AP11441 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBL4AP11441 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
UBL4AP11441 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBL4AP11441 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.11■□□□□ 0.81
UBL4AP11441 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.11■□□□□ 0.81
UBL4AP11441 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
UBL4AP11441 GUSBP5-202ENST00000510805 1989 ntBASIC20.11■□□□□ 0.81
UBL4AP11441 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.11■□□□□ 0.81
UBL4AP11441 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
UBL4AP11441 AL117328.2-201ENST00000624617 1940 ntBASIC20.11■□□□□ 0.81
UBL4AP11441 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
UBL4AP11441 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBL4AP11441 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.11■□□□□ 0.81
UBL4AP11441 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.1■□□□□ 0.81
UBL4AP11441 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.1■□□□□ 0.81
UBL4AP11441 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBL4AP11441 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBL4AP11441 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UBL4AP11441 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.1■□□□□ 0.81
UBL4AP11441 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UBL4AP11441 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
UBL4AP11441 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBL4AP11441 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.1■□□□□ 0.81
UBL4AP11441 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBL4AP11441 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.1■□□□□ 0.81
UBL4AP11441 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.1■□□□□ 0.81
UBL4AP11441 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBL4AP11441 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.1■□□□□ 0.81
UBL4AP11441 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBL4AP11441 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBL4AP11441 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.09■□□□□ 0.81
UBL4AP11441 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBL4AP11441 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.09■□□□□ 0.81
UBL4AP11441 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.09■□□□□ 0.81
UBL4AP11441 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBL4AP11441 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBL4AP11441 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBL4AP11441 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBL4AP11441 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.09■□□□□ 0.81
UBL4AP11441 AC011298.3-201ENST00000615796 283 ntBASIC20.09■□□□□ 0.81
UBL4AP11441 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
UBL4AP11441 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
UBL4AP11441 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBL4AP11441 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
UBL4AP11441 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBL4AP11441 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBL4AP11441 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBL4AP11441 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBL4AP11441 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
UBL4AP11441 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
UBL4AP11441 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBL4AP11441 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
UBL4AP11441 OR2I1P-207ENST00000453522 948 ntBASIC20.08■□□□□ 0.81
UBL4AP11441 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.08■□□□□ 0.81
UBL4AP11441 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.08■□□□□ 0.81
UBL4AP11441 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UBL4AP11441 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
UBL4AP11441 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UBL4AP11441 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UBL4AP11441 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.08■□□□□ 0.8
UBL4AP11441 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBL4AP11441 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBL4AP11441 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBL4AP11441 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBL4AP11441 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
UBL4AP11441 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBL4AP11441 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
UBL4AP11441 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
UBL4AP11441 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
UBL4AP11441 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBL4AP11441 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
UBL4AP11441 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBL4AP11441 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.07■□□□□ 0.8
UBL4AP11441 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
UBL4AP11441 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.07■□□□□ 0.8
UBL4AP11441 AC136469.2-201ENST00000623944 1028 ntBASIC20.07■□□□□ 0.8
UBL4AP11441 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
UBL4AP11441 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBL4AP11441 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
UBL4AP11441 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
UBL4AP11441 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBL4AP11441 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
UBL4AP11441 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBL4AP11441 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBL4AP11441 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBL4AP11441 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.06■□□□□ 0.8
UBL4AP11441 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBL4AP11441 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBL4AP11441 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
UBL4AP11441 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.06■□□□□ 0.8
UBL4AP11441 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
UBL4AP11441 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms