Protein–RNA interactions for Protein: P11047

LAMC1, Laminin subunit gamma-1, humanhuman

Predictions only

Length 1,609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC1P11047 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
LAMC1P11047 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
LAMC1P11047 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC31.23■■■□□ 2.59
LAMC1P11047 AC104771.1-201ENST00000603335 964 ntBASIC31.23■■■□□ 2.59
LAMC1P11047 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
LAMC1P11047 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
LAMC1P11047 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
LAMC1P11047 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
LAMC1P11047 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
LAMC1P11047 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
LAMC1P11047 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
LAMC1P11047 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
LAMC1P11047 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
LAMC1P11047 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
LAMC1P11047 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC31.21■■■□□ 2.59
LAMC1P11047 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC31.21■■■□□ 2.59
LAMC1P11047 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
LAMC1P11047 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC31.2■■■□□ 2.59
LAMC1P11047 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC31.2■■■□□ 2.59
LAMC1P11047 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC31.2■■■□□ 2.59
LAMC1P11047 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
LAMC1P11047 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
LAMC1P11047 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
LAMC1P11047 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC31.2■■■□□ 2.58
LAMC1P11047 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
LAMC1P11047 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
LAMC1P11047 SMUG1P1-201ENST00000590640 811 ntBASIC31.2■■■□□ 2.58
LAMC1P11047 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC31.19■■■□□ 2.58
LAMC1P11047 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
LAMC1P11047 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
LAMC1P11047 AC010141.3-201ENST00000456659 717 ntBASIC31.19■■■□□ 2.58
LAMC1P11047 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC31.19■■■□□ 2.58
LAMC1P11047 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC31.19■■■□□ 2.58
LAMC1P11047 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC31.19■■■□□ 2.58
LAMC1P11047 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC31.19■■■□□ 2.58
LAMC1P11047 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
LAMC1P11047 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
LAMC1P11047 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
LAMC1P11047 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
LAMC1P11047 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC31.18■■■□□ 2.58
LAMC1P11047 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC31.18■■■□□ 2.58
LAMC1P11047 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC31.18■■■□□ 2.58
LAMC1P11047 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC31.18■■■□□ 2.58
LAMC1P11047 ESRRAP2-201ENST00000418437 1549 ntBASIC31.18■■■□□ 2.58
LAMC1P11047 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
LAMC1P11047 CDCA4P2-201ENST00000441182 718 ntBASIC31.17■■■□□ 2.58
LAMC1P11047 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
LAMC1P11047 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
LAMC1P11047 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
LAMC1P11047 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
LAMC1P11047 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
LAMC1P11047 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC31.16■■■□□ 2.58
LAMC1P11047 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
LAMC1P11047 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
LAMC1P11047 THRA-202ENST00000394121 2260 ntTSL 2 BASIC31.16■■■□□ 2.58
LAMC1P11047 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC31.16■■■□□ 2.58
LAMC1P11047 GALNS-213ENST00000569433 723 ntTSL 3 BASIC31.16■■■□□ 2.58
LAMC1P11047 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
LAMC1P11047 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
LAMC1P11047 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC31.15■■■□□ 2.58
LAMC1P11047 AC080038.1-201ENST00000611274 1154 ntBASIC31.15■■■□□ 2.58
LAMC1P11047 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC31.15■■■□□ 2.58
LAMC1P11047 BX005040.4-201ENST00000637145 1518 ntBASIC31.15■■■□□ 2.58
LAMC1P11047 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
LAMC1P11047 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
LAMC1P11047 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
LAMC1P11047 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
LAMC1P11047 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
LAMC1P11047 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
LAMC1P11047 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC31.13■■■□□ 2.57
LAMC1P11047 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
LAMC1P11047 DBI-210ENST00000542275 757 ntTSL 5 BASIC31.13■■■□□ 2.57
LAMC1P11047 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC31.13■■■□□ 2.57
LAMC1P11047 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
LAMC1P11047 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
LAMC1P11047 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
LAMC1P11047 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC31.13■■■□□ 2.57
LAMC1P11047 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC31.13■■■□□ 2.57
LAMC1P11047 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC31.13■■■□□ 2.57
LAMC1P11047 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
LAMC1P11047 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
LAMC1P11047 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
LAMC1P11047 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
LAMC1P11047 AC016769.1-201ENST00000409132 1010 ntBASIC31.12■■■□□ 2.57
LAMC1P11047 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC31.12■■■□□ 2.57
LAMC1P11047 GAS2L1P2-201ENST00000436355 1356 ntBASIC31.12■■■□□ 2.57
LAMC1P11047 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
LAMC1P11047 AC004854.2-201ENST00000608450 1441 ntBASIC31.11■■■□□ 2.57
LAMC1P11047 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC31.11■■■□□ 2.57
LAMC1P11047 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
LAMC1P11047 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
LAMC1P11047 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
LAMC1P11047 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC31.11■■■□□ 2.57
LAMC1P11047 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC31.11■■■□□ 2.57
LAMC1P11047 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC31.11■■■□□ 2.57
LAMC1P11047 GXYLT1P5-201ENST00000614548 1189 ntBASIC31.11■■■□□ 2.57
LAMC1P11047 WWOX-218ENST00000627394 894 ntTSL 5 BASIC31.11■■■□□ 2.57
LAMC1P11047 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
LAMC1P11047 NFE2L3P1-201ENST00000588207 1959 ntBASIC31.11■■■□□ 2.57
LAMC1P11047 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms