Protein–RNA interactions for Protein: P0DJI8

SAA1, Serum amyloid A-1 protein, humanhuman

Predicted RBP Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA1P0DJI8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SAA1P0DJI8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SAA1P0DJI8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SAA1P0DJI8 MIR3621-201ENST00000580529 85 ntBASIC17.57■□□□□ 0.4
SAA1P0DJI8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.57■□□□□ 0.4
SAA1P0DJI8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.57■□□□□ 0.4
SAA1P0DJI8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SAA1P0DJI8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SAA1P0DJI8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SAA1P0DJI8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.57■□□□□ 0.4
SAA1P0DJI8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SAA1P0DJI8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.57■□□□□ 0.4
SAA1P0DJI8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.57■□□□□ 0.4
SAA1P0DJI8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.57■□□□□ 0.4
SAA1P0DJI8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.57■□□□□ 0.4
SAA1P0DJI8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SAA1P0DJI8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.56■□□□□ 0.4
SAA1P0DJI8 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.56■□□□□ 0.4
SAA1P0DJI8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.56■□□□□ 0.4
SAA1P0DJI8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SAA1P0DJI8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SAA1P0DJI8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SAA1P0DJI8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SAA1P0DJI8 AC006455.2-201ENST00000429931 906 ntBASIC17.56■□□□□ 0.4
SAA1P0DJI8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.56■□□□□ 0.4
SAA1P0DJI8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SAA1P0DJI8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.56■□□□□ 0.4
SAA1P0DJI8 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SAA1P0DJI8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.56■□□□□ 0.4
SAA1P0DJI8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SAA1P0DJI8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SAA1P0DJI8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SAA1P0DJI8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SAA1P0DJI8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.55■□□□□ 0.4
SAA1P0DJI8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SAA1P0DJI8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SAA1P0DJI8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.55■□□□□ 0.4
SAA1P0DJI8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SAA1P0DJI8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SAA1P0DJI8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
SAA1P0DJI8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.55■□□□□ 0.4
SAA1P0DJI8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.55■□□□□ 0.4
SAA1P0DJI8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.55■□□□□ 0.4
SAA1P0DJI8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SAA1P0DJI8 CA15P2-201ENST00000611168 834 ntBASIC17.55■□□□□ 0.4
SAA1P0DJI8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SAA1P0DJI8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SAA1P0DJI8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SAA1P0DJI8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SAA1P0DJI8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
SAA1P0DJI8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SAA1P0DJI8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SAA1P0DJI8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SAA1P0DJI8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SAA1P0DJI8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.54■□□□□ 0.4
SAA1P0DJI8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SAA1P0DJI8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.54■□□□□ 0.4
SAA1P0DJI8 AC133637.1-201ENST00000624115 1537 ntBASIC17.54■□□□□ 0.4
SAA1P0DJI8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SAA1P0DJI8 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SAA1P0DJI8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.54■□□□□ 0.4
SAA1P0DJI8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.54■□□□□ 0.4
SAA1P0DJI8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SAA1P0DJI8 AC099791.2-201ENST00000605725 427 ntBASIC17.54■□□□□ 0.4
SAA1P0DJI8 pRNA.6-201ENST00000610482 90 ntBASIC17.54■□□□□ 0.4
SAA1P0DJI8 pRNA.5-201ENST00000612139 90 ntBASIC17.54■□□□□ 0.4
SAA1P0DJI8 pRNA.11-201ENST00000618423 90 ntBASIC17.54■□□□□ 0.4
SAA1P0DJI8 pRNA.13-201ENST00000619112 90 ntBASIC17.54■□□□□ 0.4
SAA1P0DJI8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SAA1P0DJI8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SAA1P0DJI8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SAA1P0DJI8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SAA1P0DJI8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
SAA1P0DJI8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SAA1P0DJI8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
SAA1P0DJI8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SAA1P0DJI8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SAA1P0DJI8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.53■□□□□ 0.4
SAA1P0DJI8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SAA1P0DJI8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SAA1P0DJI8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SAA1P0DJI8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.53■□□□□ 0.4
SAA1P0DJI8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.53■□□□□ 0.4
SAA1P0DJI8 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.53■□□□□ 0.4
SAA1P0DJI8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SAA1P0DJI8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SAA1P0DJI8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.53■□□□□ 0.4
SAA1P0DJI8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SAA1P0DJI8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SAA1P0DJI8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SAA1P0DJI8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.53■□□□□ 0.4
SAA1P0DJI8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SAA1P0DJI8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.52■□□□□ 0.4
SAA1P0DJI8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.52■□□□□ 0.4
SAA1P0DJI8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SAA1P0DJI8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SAA1P0DJI8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SAA1P0DJI8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SAA1P0DJI8 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.52■□□□□ 0.4
SAA1P0DJI8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms