Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FREM3P0C091 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FREM3P0C091 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FREM3P0C091 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FREM3P0C091 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.88■□□□□ 0.77
FREM3P0C091 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FREM3P0C091 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FREM3P0C091 AL031602.1-201ENST00000633169 911 ntBASIC19.88■□□□□ 0.77
FREM3P0C091 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.88■□□□□ 0.77
FREM3P0C091 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
FREM3P0C091 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FREM3P0C091 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FREM3P0C091 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FREM3P0C091 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FREM3P0C091 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FREM3P0C091 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.87■□□□□ 0.77
FREM3P0C091 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FREM3P0C091 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
FREM3P0C091 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.87■□□□□ 0.77
FREM3P0C091 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FREM3P0C091 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.87■□□□□ 0.77
FREM3P0C091 KRT18P14-201ENST00000534205 1250 ntBASIC19.87■□□□□ 0.77
FREM3P0C091 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.86■□□□□ 0.77
FREM3P0C091 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
FREM3P0C091 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
FREM3P0C091 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
FREM3P0C091 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
FREM3P0C091 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.86■□□□□ 0.77
FREM3P0C091 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
FREM3P0C091 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
FREM3P0C091 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FREM3P0C091 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
FREM3P0C091 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
FREM3P0C091 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
FREM3P0C091 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FREM3P0C091 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.85■□□□□ 0.77
FREM3P0C091 C1orf229-201ENST00000623686 2258 ntBASIC19.85■□□□□ 0.77
FREM3P0C091 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
FREM3P0C091 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
FREM3P0C091 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FREM3P0C091 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.85■□□□□ 0.77
FREM3P0C091 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FREM3P0C091 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FREM3P0C091 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FREM3P0C091 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
FREM3P0C091 DUX4L2-201ENST00000561772 1275 ntBASIC19.85■□□□□ 0.77
FREM3P0C091 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
FREM3P0C091 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
FREM3P0C091 MIR6821-201ENST00000617625 74 ntBASIC19.85■□□□□ 0.77
FREM3P0C091 DUX4L6-201ENST00000626483 1275 ntBASIC19.85■□□□□ 0.77
FREM3P0C091 DUX4L1-201ENST00000627662 1275 ntBASIC19.85■□□□□ 0.77
FREM3P0C091 DUX4L8-201ENST00000629013 1275 ntBASIC19.85■□□□□ 0.77
FREM3P0C091 DUX4L3-201ENST00000630187 1275 ntBASIC19.85■□□□□ 0.77
FREM3P0C091 DUX4L7-201ENST00000630678 1275 ntBASIC19.85■□□□□ 0.77
FREM3P0C091 DUX4L5-201ENST00000630834 1275 ntBASIC19.85■□□□□ 0.77
FREM3P0C091 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
FREM3P0C091 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
FREM3P0C091 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.84■□□□□ 0.77
FREM3P0C091 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FREM3P0C091 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FREM3P0C091 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.84■□□□□ 0.77
FREM3P0C091 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FREM3P0C091 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FREM3P0C091 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FREM3P0C091 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
FREM3P0C091 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FREM3P0C091 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FREM3P0C091 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FREM3P0C091 AC233723.2-201ENST00000623798 2106 ntBASIC19.84■□□□□ 0.77
FREM3P0C091 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
FREM3P0C091 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
FREM3P0C091 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
FREM3P0C091 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FREM3P0C091 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
FREM3P0C091 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
FREM3P0C091 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
FREM3P0C091 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FREM3P0C091 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.83■□□□□ 0.77
FREM3P0C091 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
FREM3P0C091 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FREM3P0C091 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
FREM3P0C091 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
FREM3P0C091 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FREM3P0C091 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
FREM3P0C091 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FREM3P0C091 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FREM3P0C091 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.82■□□□□ 0.76
FREM3P0C091 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.82■□□□□ 0.76
FREM3P0C091 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.82■□□□□ 0.76
FREM3P0C091 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FREM3P0C091 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FREM3P0C091 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
FREM3P0C091 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
FREM3P0C091 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.82■□□□□ 0.76
FREM3P0C091 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
FREM3P0C091 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FREM3P0C091 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.82■□□□□ 0.76
FREM3P0C091 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
FREM3P0C091 MIR5787-201ENST00000611784 55 ntBASIC19.82■□□□□ 0.76
FREM3P0C091 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms