Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 AL353803.4-201ENST00000565882 1934 ntBASIC19.26■□□□□ 0.67
ERCC1P07992 AC137767.1-201ENST00000602918 1920 ntBASIC19.26■□□□□ 0.67
ERCC1P07992 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.26■□□□□ 0.67
ERCC1P07992 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ERCC1P07992 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ERCC1P07992 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
ERCC1P07992 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERCC1P07992 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERCC1P07992 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERCC1P07992 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERCC1P07992 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.25■□□□□ 0.67
ERCC1P07992 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC1P07992 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ERCC1P07992 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC1P07992 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.25■□□□□ 0.67
ERCC1P07992 EDA-201ENST00000338901 1233 ntBASIC19.25■□□□□ 0.67
ERCC1P07992 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.25■□□□□ 0.67
ERCC1P07992 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC1P07992 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERCC1P07992 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.25■□□□□ 0.67
ERCC1P07992 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.25■□□□□ 0.67
ERCC1P07992 AC009102.2-201ENST00000606772 1639 ntBASIC19.25■□□□□ 0.67
ERCC1P07992 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.24■□□□□ 0.67
ERCC1P07992 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC1P07992 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC1P07992 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.24■□□□□ 0.67
ERCC1P07992 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ERCC1P07992 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC1P07992 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC1P07992 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC1P07992 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC1P07992 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC1P07992 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.24■□□□□ 0.67
ERCC1P07992 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ERCC1P07992 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC1P07992 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.24■□□□□ 0.67
ERCC1P07992 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC1P07992 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC1P07992 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC1P07992 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ERCC1P07992 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC1P07992 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC1P07992 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC1P07992 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC1P07992 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
ERCC1P07992 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.23■□□□□ 0.67
ERCC1P07992 AL138724.1-201ENST00000606771 1088 ntBASIC19.23■□□□□ 0.67
ERCC1P07992 AL355001.2-201ENST00000620617 1191 ntBASIC19.23■□□□□ 0.67
ERCC1P07992 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC1P07992 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC1P07992 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.23■□□□□ 0.67
ERCC1P07992 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ERCC1P07992 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC1P07992 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC1P07992 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
ERCC1P07992 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.22■□□□□ 0.67
ERCC1P07992 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ERCC1P07992 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ERCC1P07992 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.22■□□□□ 0.67
ERCC1P07992 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC1P07992 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC1P07992 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ERCC1P07992 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC1P07992 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC1P07992 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ERCC1P07992 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.22■□□□□ 0.67
ERCC1P07992 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.22■□□□□ 0.67
ERCC1P07992 AC099791.2-201ENST00000605725 427 ntBASIC19.22■□□□□ 0.67
ERCC1P07992 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.22■□□□□ 0.67
ERCC1P07992 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC1P07992 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ERCC1P07992 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC1P07992 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ERCC1P07992 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
ERCC1P07992 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC1P07992 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC1P07992 AC024257.2-201ENST00000549699 147 ntBASIC19.21■□□□□ 0.67
ERCC1P07992 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC1P07992 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC1P07992 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.21■□□□□ 0.67
ERCC1P07992 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC1P07992 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC1P07992 C17orf82-201ENST00000623772 1530 ntBASIC19.2■□□□□ 0.66
ERCC1P07992 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC1P07992 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC1P07992 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC1P07992 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC1P07992 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC1P07992 AC009086.3-201ENST00000623486 1008 ntBASIC19.2■□□□□ 0.66
ERCC1P07992 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC1P07992 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC1P07992 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC1P07992 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC1P07992 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ERCC1P07992 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
ERCC1P07992 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.2■□□□□ 0.66
ERCC1P07992 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC1P07992 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC1P07992 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ERCC1P07992 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms