Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RETP07949 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.07■■□□□ 1.12
RETP07949 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RETP07949 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
RETP07949 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.07■■□□□ 1.12
RETP07949 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.07■■□□□ 1.12
RETP07949 AC142086.2-201ENST00000569753 217 ntBASIC22.07■■□□□ 1.12
RETP07949 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.07■■□□□ 1.12
RETP07949 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22.07■■□□□ 1.12
RETP07949 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.07■■□□□ 1.12
RETP07949 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
RETP07949 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RETP07949 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RETP07949 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RETP07949 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RETP07949 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RETP07949 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.06■■□□□ 1.12
RETP07949 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.06■■□□□ 1.12
RETP07949 AC011767.1-201ENST00000617410 1153 ntBASIC22.06■■□□□ 1.12
RETP07949 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.06■■□□□ 1.12
RETP07949 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
RETP07949 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.06■■□□□ 1.12
RETP07949 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
RETP07949 AC004812.2-201ENST00000611079 2094 ntBASIC22.05■■□□□ 1.12
RETP07949 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RETP07949 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RETP07949 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
RETP07949 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.05■■□□□ 1.12
RETP07949 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RETP07949 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.05■■□□□ 1.12
RETP07949 DUSP8P5-201ENST00000422884 1815 ntBASIC22.05■■□□□ 1.12
RETP07949 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.05■■□□□ 1.12
RETP07949 ALDH1A3-203ENST00000557963 1670 ntBASIC22.04■■□□□ 1.12
RETP07949 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RETP07949 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.04■■□□□ 1.12
RETP07949 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RETP07949 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RETP07949 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.04■■□□□ 1.12
RETP07949 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
RETP07949 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RETP07949 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.04■■□□□ 1.12
RETP07949 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.04■■□□□ 1.12
RETP07949 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
RETP07949 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.04■■□□□ 1.12
RETP07949 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RETP07949 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
RETP07949 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RETP07949 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.03■■□□□ 1.12
RETP07949 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
RETP07949 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.03■■□□□ 1.12
RETP07949 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.03■■□□□ 1.12
RETP07949 KRT18P6-201ENST00000555540 1265 ntBASIC22.03■■□□□ 1.12
RETP07949 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.03■■□□□ 1.12
RETP07949 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
RETP07949 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
RETP07949 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.03■■□□□ 1.12
RETP07949 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RETP07949 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.03■■□□□ 1.12
RETP07949 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RETP07949 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
RETP07949 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RETP07949 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RETP07949 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.02■■□□□ 1.12
RETP07949 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.02■■□□□ 1.12
RETP07949 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.02■■□□□ 1.12
RETP07949 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.11
RETP07949 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
RETP07949 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.01■■□□□ 1.11
RETP07949 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RETP07949 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RETP07949 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
RETP07949 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RETP07949 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RETP07949 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
RETP07949 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
RETP07949 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RETP07949 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
RETP07949 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22■■□□□ 1.11
RETP07949 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RETP07949 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RETP07949 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22■■□□□ 1.11
RETP07949 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22■■□□□ 1.11
RETP07949 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22■■□□□ 1.11
RETP07949 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22■■□□□ 1.11
RETP07949 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22■■□□□ 1.11
RETP07949 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22■■□□□ 1.11
RETP07949 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RETP07949 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RETP07949 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
RETP07949 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RETP07949 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.99■■□□□ 1.11
RETP07949 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RETP07949 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RETP07949 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
RETP07949 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RETP07949 AL121832.2-201ENST00000610979 668 ntBASIC21.99■■□□□ 1.11
RETP07949 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
RETP07949 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
RETP07949 FP325331.1-202ENST00000623531 1380 ntBASIC21.99■■□□□ 1.11
RETP07949 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms