Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TCRAP04437 DUX4L18-201ENST00000553347 1267 ntBASIC16.59■□□□□ 0.25
TCRAP04437 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.59■□□□□ 0.25
TCRAP04437 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TCRAP04437 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRAP04437 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRAP04437 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRAP04437 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TCRAP04437 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRAP04437 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TCRAP04437 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TCRAP04437 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TCRAP04437 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TCRAP04437 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
TCRAP04437 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TCRAP04437 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TCRAP04437 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TCRAP04437 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.58■□□□□ 0.24
TCRAP04437 AC009086.3-201ENST00000623486 1008 ntBASIC16.58■□□□□ 0.24
TCRAP04437 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TCRAP04437 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TCRAP04437 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TCRAP04437 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TCRAP04437 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TCRAP04437 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TCRAP04437 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TCRAP04437 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
TCRAP04437 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TCRAP04437 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TCRAP04437 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TCRAP04437 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TCRAP04437 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.57■□□□□ 0.24
TCRAP04437 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
TCRAP04437 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TCRAP04437 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TCRAP04437 SNX5-217ENST00000606557 1087 ntBASIC16.57■□□□□ 0.24
TCRAP04437 BHLHE23-202ENST00000612929 1109 ntBASIC16.57■□□□□ 0.24
TCRAP04437 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TCRAP04437 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TCRAP04437 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TCRAP04437 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.57■□□□□ 0.24
TCRAP04437 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.56■□□□□ 0.24
TCRAP04437 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TCRAP04437 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TCRAP04437 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TCRAP04437 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TCRAP04437 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TCRAP04437 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TCRAP04437 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.56■□□□□ 0.24
TCRAP04437 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.56■□□□□ 0.24
TCRAP04437 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.56■□□□□ 0.24
TCRAP04437 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.56■□□□□ 0.24
TCRAP04437 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TCRAP04437 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.56■□□□□ 0.24
TCRAP04437 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TCRAP04437 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
TCRAP04437 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TCRAP04437 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TCRAP04437 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TCRAP04437 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
TCRAP04437 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TCRAP04437 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRAP04437 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRAP04437 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TCRAP04437 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.55■□□□□ 0.24
TCRAP04437 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRAP04437 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.55■□□□□ 0.24
TCRAP04437 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRAP04437 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
TCRAP04437 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRAP04437 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRAP04437 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.55■□□□□ 0.24
TCRAP04437 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
TCRAP04437 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.55■□□□□ 0.24
TCRAP04437 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRAP04437 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TCRAP04437 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRAP04437 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.55■□□□□ 0.24
TCRAP04437 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
TCRAP04437 AC074183.2-201ENST00000623112 922 ntBASIC16.55■□□□□ 0.24
TCRAP04437 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRAP04437 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.55■□□□□ 0.24
TCRAP04437 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRAP04437 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRAP04437 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRAP04437 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
TCRAP04437 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRAP04437 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRAP04437 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRAP04437 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TCRAP04437 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.54■□□□□ 0.24
TCRAP04437 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRAP04437 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRAP04437 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.54■□□□□ 0.24
TCRAP04437 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TCRAP04437 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRAP04437 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.54■□□□□ 0.24
TCRAP04437 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.53■□□□□ 0.24
TCRAP04437 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.53■□□□□ 0.24
TCRAP04437 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms