Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC13.85□□□□□ -0.19
APOBP04114 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOBP04114 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC13.85□□□□□ -0.19
APOBP04114 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.85□□□□□ -0.19
APOBP04114 AC083880.1-201ENST00000608266 535 ntBASIC13.85□□□□□ -0.19
APOBP04114 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOBP04114 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
APOBP04114 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOBP04114 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOBP04114 AL121749.1-202ENST00000609313 2153 ntBASIC13.85□□□□□ -0.19
APOBP04114 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOBP04114 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
APOBP04114 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOBP04114 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC13.85□□□□□ -0.19
APOBP04114 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
APOBP04114 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC13.85□□□□□ -0.19
APOBP04114 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOBP04114 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOBP04114 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOBP04114 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC13.85□□□□□ -0.19
APOBP04114 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC13.85□□□□□ -0.19
APOBP04114 AC079140.4-201ENST00000507448 529 ntBASIC13.85□□□□□ -0.19
APOBP04114 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC13.85□□□□□ -0.19
APOBP04114 AC104187.1-201ENST00000607510 612 ntBASIC13.85□□□□□ -0.19
APOBP04114 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC13.85□□□□□ -0.19
APOBP04114 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOBP04114 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOBP04114 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC13.84□□□□□ -0.19
APOBP04114 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOBP04114 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
APOBP04114 AC007322.1-201ENST00000426983 750 ntBASIC13.84□□□□□ -0.19
APOBP04114 RARRES2P4-201ENST00000514074 484 ntBASIC13.84□□□□□ -0.19
APOBP04114 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOBP04114 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOBP04114 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOBP04114 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC13.84□□□□□ -0.19
APOBP04114 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC13.84□□□□□ -0.19
APOBP04114 MYC-209ENST00000641252 345 ntBASIC13.84□□□□□ -0.19
APOBP04114 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
APOBP04114 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
APOBP04114 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC13.83□□□□□ -0.2
APOBP04114 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC13.83□□□□□ -0.2
APOBP04114 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
APOBP04114 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOBP04114 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC13.83□□□□□ -0.2
APOBP04114 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.83□□□□□ -0.2
APOBP04114 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
APOBP04114 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC13.83□□□□□ -0.2
APOBP04114 AC133041.1-202ENST00000642053 222 ntBASIC13.83□□□□□ -0.2
APOBP04114 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
APOBP04114 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOBP04114 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
APOBP04114 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.82□□□□□ -0.2
APOBP04114 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APOBP04114 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APOBP04114 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOBP04114 DUSP8P5-201ENST00000422884 1815 ntBASIC13.82□□□□□ -0.2
APOBP04114 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APOBP04114 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOBP04114 FAM201B-201ENST00000458407 597 ntBASIC13.82□□□□□ -0.2
APOBP04114 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC13.82□□□□□ -0.2
APOBP04114 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOBP04114 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOBP04114 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOBP04114 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APOBP04114 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOBP04114 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC13.82□□□□□ -0.2
APOBP04114 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOBP04114 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOBP04114 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
APOBP04114 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
APOBP04114 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC13.81□□□□□ -0.2
APOBP04114 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOBP04114 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC13.81□□□□□ -0.2
APOBP04114 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
APOBP04114 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
APOBP04114 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOBP04114 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOBP04114 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOBP04114 MFF-207ENST00000409565 1548 ntTSL 2 BASIC13.81□□□□□ -0.2
APOBP04114 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOBP04114 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC13.81□□□□□ -0.2
APOBP04114 AC093787.1-201ENST00000450396 207 ntBASIC13.81□□□□□ -0.2
APOBP04114 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC13.81□□□□□ -0.2
APOBP04114 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOBP04114 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
APOBP04114 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.8□□□□□ -0.2
APOBP04114 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
APOBP04114 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
APOBP04114 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOBP04114 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
APOBP04114 AC079630.1-202ENST00000618127 1840 ntBASIC13.8□□□□□ -0.2
APOBP04114 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOBP04114 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.8□□□□□ -0.2
APOBP04114 CYP2T1P-201ENST00000432607 1285 ntBASIC13.8□□□□□ -0.2
APOBP04114 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC13.8□□□□□ -0.2
APOBP04114 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.8□□□□□ -0.2
APOBP04114 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
APOBP04114 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
APOBP04114 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms