Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHRNA1P02708 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CHRNA1P02708 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHRNA1P02708 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHRNA1P02708 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHRNA1P02708 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CHRNA1P02708 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CHRNA1P02708 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.97■■□□□ 1.43
CHRNA1P02708 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.97■■□□□ 1.43
CHRNA1P02708 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHRNA1P02708 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
CHRNA1P02708 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHRNA1P02708 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CHRNA1P02708 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.96■■□□□ 1.43
CHRNA1P02708 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHRNA1P02708 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHRNA1P02708 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
CHRNA1P02708 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
CHRNA1P02708 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.95■■□□□ 1.42
CHRNA1P02708 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CHRNA1P02708 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CHRNA1P02708 KRT19P1-201ENST00000405746 1186 ntBASIC23.95■■□□□ 1.42
CHRNA1P02708 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CHRNA1P02708 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.95■■□□□ 1.42
CHRNA1P02708 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.95■■□□□ 1.42
CHRNA1P02708 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.95■■□□□ 1.42
CHRNA1P02708 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHRNA1P02708 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.94■■□□□ 1.42
CHRNA1P02708 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.94■■□□□ 1.42
CHRNA1P02708 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.94■■□□□ 1.42
CHRNA1P02708 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.94■■□□□ 1.42
CHRNA1P02708 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.94■■□□□ 1.42
CHRNA1P02708 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.94■■□□□ 1.42
CHRNA1P02708 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
CHRNA1P02708 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHRNA1P02708 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.93■■□□□ 1.42
CHRNA1P02708 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
CHRNA1P02708 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.93■■□□□ 1.42
CHRNA1P02708 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CHRNA1P02708 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.93■■□□□ 1.42
CHRNA1P02708 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.93■■□□□ 1.42
CHRNA1P02708 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.93■■□□□ 1.42
CHRNA1P02708 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.93■■□□□ 1.42
CHRNA1P02708 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.93■■□□□ 1.42
CHRNA1P02708 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.93■■□□□ 1.42
CHRNA1P02708 BID-214ENST00000617586 542 ntTSL 5 BASIC23.93■■□□□ 1.42
CHRNA1P02708 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.93■■□□□ 1.42
CHRNA1P02708 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CHRNA1P02708 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
CHRNA1P02708 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CHRNA1P02708 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
CHRNA1P02708 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.92■■□□□ 1.42
CHRNA1P02708 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.92■■□□□ 1.42
CHRNA1P02708 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
CHRNA1P02708 AC079140.4-201ENST00000507448 529 ntBASIC23.92■■□□□ 1.42
CHRNA1P02708 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.92■■□□□ 1.42
CHRNA1P02708 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHRNA1P02708 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
CHRNA1P02708 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHRNA1P02708 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHRNA1P02708 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.91■■□□□ 1.42
CHRNA1P02708 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHRNA1P02708 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHRNA1P02708 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHRNA1P02708 AC026185.1-201ENST00000445748 174 ntBASIC23.91■■□□□ 1.42
CHRNA1P02708 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHRNA1P02708 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.91■■□□□ 1.42
CHRNA1P02708 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CHRNA1P02708 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CHRNA1P02708 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHRNA1P02708 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.91■■□□□ 1.42
CHRNA1P02708 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHRNA1P02708 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.9■■□□□ 1.42
CHRNA1P02708 ANOS2P-203ENST00000472227 1816 ntBASIC23.9■■□□□ 1.42
CHRNA1P02708 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CHRNA1P02708 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
CHRNA1P02708 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CHRNA1P02708 ESRRAP2-201ENST00000418437 1549 ntBASIC23.89■■□□□ 1.42
CHRNA1P02708 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CHRNA1P02708 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
CHRNA1P02708 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.89■■□□□ 1.41
CHRNA1P02708 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
CHRNA1P02708 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.89■■□□□ 1.41
CHRNA1P02708 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.89■■□□□ 1.41
CHRNA1P02708 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CHRNA1P02708 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
CHRNA1P02708 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CHRNA1P02708 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHRNA1P02708 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHRNA1P02708 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.88■■□□□ 1.41
CHRNA1P02708 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CHRNA1P02708 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
CHRNA1P02708 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CHRNA1P02708 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHRNA1P02708 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.88■■□□□ 1.41
CHRNA1P02708 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.88■■□□□ 1.41
CHRNA1P02708 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CHRNA1P02708 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHRNA1P02708 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
CHRNA1P02708 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms