Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.27■□□□□ 0.36
IFNA1P01562 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
IFNA1P01562 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IFNA1P01562 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
IFNA1P01562 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IFNA1P01562 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
IFNA1P01562 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IFNA1P01562 AL162393.1-201ENST00000437852 946 ntBASIC17.27■□□□□ 0.36
IFNA1P01562 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
IFNA1P01562 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.27■□□□□ 0.36
IFNA1P01562 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.27■□□□□ 0.36
IFNA1P01562 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
IFNA1P01562 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
IFNA1P01562 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
IFNA1P01562 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
IFNA1P01562 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
IFNA1P01562 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IFNA1P01562 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFNA1P01562 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFNA1P01562 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
IFNA1P01562 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
IFNA1P01562 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFNA1P01562 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.26■□□□□ 0.35
IFNA1P01562 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.26■□□□□ 0.35
IFNA1P01562 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.26■□□□□ 0.35
IFNA1P01562 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
IFNA1P01562 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IFNA1P01562 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.26■□□□□ 0.35
IFNA1P01562 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
IFNA1P01562 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFNA1P01562 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IFNA1P01562 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
IFNA1P01562 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFNA1P01562 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFNA1P01562 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFNA1P01562 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFNA1P01562 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.25■□□□□ 0.35
IFNA1P01562 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
IFNA1P01562 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
IFNA1P01562 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
IFNA1P01562 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFNA1P01562 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFNA1P01562 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.25■□□□□ 0.35
IFNA1P01562 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
IFNA1P01562 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.25■□□□□ 0.35
IFNA1P01562 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFNA1P01562 RP9P-202ENST00000450133 1212 ntBASIC17.25■□□□□ 0.35
IFNA1P01562 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFNA1P01562 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFNA1P01562 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IFNA1P01562 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
IFNA1P01562 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.25■□□□□ 0.35
IFNA1P01562 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
IFNA1P01562 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFNA1P01562 AC244015.2-201ENST00000616358 1861 ntBASIC17.24■□□□□ 0.35
IFNA1P01562 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.24■□□□□ 0.35
IFNA1P01562 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFNA1P01562 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFNA1P01562 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFNA1P01562 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFNA1P01562 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.24■□□□□ 0.35
IFNA1P01562 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFNA1P01562 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.24■□□□□ 0.35
IFNA1P01562 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.24■□□□□ 0.35
IFNA1P01562 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.24■□□□□ 0.35
IFNA1P01562 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFNA1P01562 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
IFNA1P01562 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFNA1P01562 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFNA1P01562 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFNA1P01562 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
IFNA1P01562 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFNA1P01562 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.23■□□□□ 0.35
IFNA1P01562 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.23■□□□□ 0.35
IFNA1P01562 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFNA1P01562 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
IFNA1P01562 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFNA1P01562 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.23■□□□□ 0.35
IFNA1P01562 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.23■□□□□ 0.35
IFNA1P01562 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFNA1P01562 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFNA1P01562 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFNA1P01562 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
IFNA1P01562 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
IFNA1P01562 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.22■□□□□ 0.35
IFNA1P01562 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFNA1P01562 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IFNA1P01562 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IFNA1P01562 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFNA1P01562 AC087742.1-201ENST00000575880 1738 ntBASIC17.22■□□□□ 0.35
IFNA1P01562 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
IFNA1P01562 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.22■□□□□ 0.35
IFNA1P01562 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.22■□□□□ 0.35
IFNA1P01562 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFNA1P01562 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.22■□□□□ 0.35
IFNA1P01562 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.22■□□□□ 0.35
IFNA1P01562 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFNA1P01562 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFNA1P01562 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.21■□□□□ 0.35
IFNA1P01562 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms