Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DHFRP00374 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
DHFRP00374 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
DHFRP00374 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.83■□□□□ 0.6
DHFRP00374 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DHFRP00374 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DHFRP00374 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DHFRP00374 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
DHFRP00374 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.83■□□□□ 0.6
DHFRP00374 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DHFRP00374 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
DHFRP00374 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.83■□□□□ 0.6
DHFRP00374 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DHFRP00374 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DHFRP00374 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.82■□□□□ 0.6
DHFRP00374 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
DHFRP00374 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
DHFRP00374 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.82■□□□□ 0.6
DHFRP00374 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
DHFRP00374 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DHFRP00374 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
DHFRP00374 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
DHFRP00374 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
DHFRP00374 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.82■□□□□ 0.6
DHFRP00374 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DHFRP00374 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DHFRP00374 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
DHFRP00374 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.82■□□□□ 0.6
DHFRP00374 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DHFRP00374 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DHFRP00374 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DHFRP00374 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DHFRP00374 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
DHFRP00374 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DHFRP00374 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DHFRP00374 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
DHFRP00374 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DHFRP00374 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DHFRP00374 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.81■□□□□ 0.6
DHFRP00374 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
DHFRP00374 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
DHFRP00374 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DHFRP00374 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DHFRP00374 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DHFRP00374 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DHFRP00374 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DHFRP00374 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DHFRP00374 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
DHFRP00374 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.8■□□□□ 0.6
DHFRP00374 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DHFRP00374 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
DHFRP00374 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
DHFRP00374 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.8■□□□□ 0.6
DHFRP00374 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DHFRP00374 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DHFRP00374 AL157384.1-201ENST00000445995 2473 ntBASIC18.8■□□□□ 0.6
DHFRP00374 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DHFRP00374 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.8■□□□□ 0.6
DHFRP00374 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DHFRP00374 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
DHFRP00374 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
DHFRP00374 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DHFRP00374 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.79■□□□□ 0.6
DHFRP00374 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
DHFRP00374 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
DHFRP00374 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DHFRP00374 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.79■□□□□ 0.6
DHFRP00374 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DHFRP00374 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DHFRP00374 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DHFRP00374 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DHFRP00374 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
DHFRP00374 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
DHFRP00374 AC007952.6-201ENST00000573168 2673 ntBASIC18.78■□□□□ 0.6
DHFRP00374 AC003957.1-201ENST00000625108 2673 ntBASIC18.78■□□□□ 0.6
DHFRP00374 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.78■□□□□ 0.6
DHFRP00374 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
DHFRP00374 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
DHFRP00374 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DHFRP00374 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DHFRP00374 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.78■□□□□ 0.6
DHFRP00374 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DHFRP00374 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
DHFRP00374 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
DHFRP00374 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.78■□□□□ 0.6
DHFRP00374 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DHFRP00374 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.77■□□□□ 0.6
DHFRP00374 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DHFRP00374 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
DHFRP00374 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DHFRP00374 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
DHFRP00374 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DHFRP00374 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DHFRP00374 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DHFRP00374 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DHFRP00374 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
DHFRP00374 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
DHFRP00374 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
DHFRP00374 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DHFRP00374 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms