Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
RPP40O75818 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.45■■□□□ 1.18
RPP40O75818 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RPP40O75818 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RPP40O75818 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
RPP40O75818 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RPP40O75818 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RPP40O75818 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.44■■□□□ 1.18
RPP40O75818 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RPP40O75818 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RPP40O75818 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
RPP40O75818 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RPP40O75818 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
RPP40O75818 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RPP40O75818 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.43■■□□□ 1.18
RPP40O75818 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.43■■□□□ 1.18
RPP40O75818 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
RPP40O75818 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.43■■□□□ 1.18
RPP40O75818 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.43■■□□□ 1.18
RPP40O75818 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RPP40O75818 C9orf163-202ENST00000624034 2573 ntBASIC22.43■■□□□ 1.18
RPP40O75818 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.42■■□□□ 1.18
RPP40O75818 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.42■■□□□ 1.18
RPP40O75818 AC144652.1-201ENST00000609974 1624 ntBASIC22.42■■□□□ 1.18
RPP40O75818 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RPP40O75818 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RPP40O75818 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.41■■□□□ 1.18
RPP40O75818 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.41■■□□□ 1.18
RPP40O75818 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.41■■□□□ 1.18
RPP40O75818 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.41■■□□□ 1.18
RPP40O75818 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RPP40O75818 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RPP40O75818 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RPP40O75818 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.41■■□□□ 1.18
RPP40O75818 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.41■■□□□ 1.18
RPP40O75818 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.41■■□□□ 1.18
RPP40O75818 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.41■■□□□ 1.18
RPP40O75818 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.41■■□□□ 1.18
RPP40O75818 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.41■■□□□ 1.18
RPP40O75818 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RPP40O75818 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RPP40O75818 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RPP40O75818 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
RPP40O75818 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
RPP40O75818 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RPP40O75818 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RPP40O75818 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RPP40O75818 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.4■■□□□ 1.18
RPP40O75818 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.4■■□□□ 1.18
RPP40O75818 AC010525.1-201ENST00000585559 441 ntBASIC22.4■■□□□ 1.18
RPP40O75818 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.4■■□□□ 1.18
RPP40O75818 AC080038.1-201ENST00000611274 1154 ntBASIC22.4■■□□□ 1.18
RPP40O75818 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.4■■□□□ 1.18
RPP40O75818 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RPP40O75818 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RPP40O75818 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.4■■□□□ 1.18
RPP40O75818 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.4■■□□□ 1.18
RPP40O75818 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RPP40O75818 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
RPP40O75818 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.39■■□□□ 1.18
RPP40O75818 AL353803.4-201ENST00000565882 1934 ntBASIC22.39■■□□□ 1.18
RPP40O75818 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
RPP40O75818 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
RPP40O75818 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.39■■□□□ 1.17
RPP40O75818 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RPP40O75818 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
RPP40O75818 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.39■■□□□ 1.17
RPP40O75818 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RPP40O75818 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RPP40O75818 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
RPP40O75818 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.39■■□□□ 1.17
RPP40O75818 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RPP40O75818 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
RPP40O75818 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RPP40O75818 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.38■■□□□ 1.17
RPP40O75818 OR2I1P-207ENST00000453522 948 ntBASIC22.38■■□□□ 1.17
RPP40O75818 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RPP40O75818 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.38■■□□□ 1.17
RPP40O75818 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
RPP40O75818 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
RPP40O75818 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RPP40O75818 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RPP40O75818 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
RPP40O75818 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.37■■□□□ 1.17
RPP40O75818 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.37■■□□□ 1.17
RPP40O75818 AL499627.2-201ENST00000606283 725 ntBASIC22.37■■□□□ 1.17
RPP40O75818 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.37■■□□□ 1.17
RPP40O75818 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RPP40O75818 AC012676.1-201ENST00000574705 1949 ntBASIC22.37■■□□□ 1.17
RPP40O75818 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RPP40O75818 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
RPP40O75818 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RPP40O75818 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RPP40O75818 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
RPP40O75818 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.36■■□□□ 1.17
RPP40O75818 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.36■■□□□ 1.17
RPP40O75818 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RPP40O75818 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RPP40O75818 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RPP40O75818 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms