Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.57■□□□□ 0.72
UPK3AO75631 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UPK3AO75631 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UPK3AO75631 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.56■□□□□ 0.72
UPK3AO75631 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UPK3AO75631 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPK3AO75631 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPK3AO75631 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPK3AO75631 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
UPK3AO75631 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPK3AO75631 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.56■□□□□ 0.72
UPK3AO75631 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
UPK3AO75631 AL138724.1-201ENST00000606771 1088 ntBASIC19.56■□□□□ 0.72
UPK3AO75631 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
UPK3AO75631 AL136162.1-201ENST00000607711 1078 ntBASIC19.56■□□□□ 0.72
UPK3AO75631 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPK3AO75631 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
UPK3AO75631 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.56■□□□□ 0.72
UPK3AO75631 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.56■□□□□ 0.72
UPK3AO75631 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UPK3AO75631 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.56■□□□□ 0.72
UPK3AO75631 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
UPK3AO75631 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPK3AO75631 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPK3AO75631 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
UPK3AO75631 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UPK3AO75631 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPK3AO75631 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.55■□□□□ 0.72
UPK3AO75631 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UPK3AO75631 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPK3AO75631 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPK3AO75631 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.55■□□□□ 0.72
UPK3AO75631 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
UPK3AO75631 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPK3AO75631 AC110285.6-201ENST00000617652 491 ntBASIC19.55■□□□□ 0.72
UPK3AO75631 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
UPK3AO75631 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPK3AO75631 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UPK3AO75631 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UPK3AO75631 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.54■□□□□ 0.72
UPK3AO75631 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
UPK3AO75631 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK3AO75631 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK3AO75631 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UPK3AO75631 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK3AO75631 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK3AO75631 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
UPK3AO75631 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.54■□□□□ 0.72
UPK3AO75631 AC024257.2-201ENST00000549699 147 ntBASIC19.54■□□□□ 0.72
UPK3AO75631 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UPK3AO75631 AC011298.3-201ENST00000615796 283 ntBASIC19.54■□□□□ 0.72
UPK3AO75631 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK3AO75631 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.54■□□□□ 0.72
UPK3AO75631 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK3AO75631 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
UPK3AO75631 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK3AO75631 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK3AO75631 AC087742.1-201ENST00000575880 1738 ntBASIC19.54■□□□□ 0.72
UPK3AO75631 AC080038.3-201ENST00000623346 1952 ntBASIC19.53■□□□□ 0.72
UPK3AO75631 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPK3AO75631 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
UPK3AO75631 AC092053.2-201ENST00000640557 1818 ntBASIC19.53■□□□□ 0.72
UPK3AO75631 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
UPK3AO75631 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPK3AO75631 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UPK3AO75631 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
UPK3AO75631 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.53■□□□□ 0.72
UPK3AO75631 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPK3AO75631 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
UPK3AO75631 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPK3AO75631 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPK3AO75631 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
UPK3AO75631 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UPK3AO75631 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
UPK3AO75631 AC135279.3-201ENST00000610945 1311 ntBASIC19.52■□□□□ 0.72
UPK3AO75631 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPK3AO75631 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UPK3AO75631 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.52■□□□□ 0.72
UPK3AO75631 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.52■□□□□ 0.72
UPK3AO75631 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
UPK3AO75631 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
UPK3AO75631 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPK3AO75631 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UPK3AO75631 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPK3AO75631 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.52■□□□□ 0.72
UPK3AO75631 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
UPK3AO75631 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.52■□□□□ 0.72
UPK3AO75631 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.52■□□□□ 0.72
UPK3AO75631 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.52■□□□□ 0.72
UPK3AO75631 PBX2P1-201ENST00000493219 1291 ntBASIC19.52■□□□□ 0.72
UPK3AO75631 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.52■□□□□ 0.72
UPK3AO75631 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.52■□□□□ 0.72
UPK3AO75631 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.52■□□□□ 0.72
UPK3AO75631 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
UPK3AO75631 AC136469.2-201ENST00000623944 1028 ntBASIC19.52■□□□□ 0.72
UPK3AO75631 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.52■□□□□ 0.72
UPK3AO75631 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
UPK3AO75631 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPK3AO75631 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.51■□□□□ 0.71
UPK3AO75631 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms