Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PFDN1O60925 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PFDN1O60925 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PFDN1O60925 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.6■□□□□ 0.73
PFDN1O60925 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.6■□□□□ 0.73
PFDN1O60925 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PFDN1O60925 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PFDN1O60925 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PFDN1O60925 AC090340.1-201ENST00000620778 4980 ntBASIC19.6■□□□□ 0.73
PFDN1O60925 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PFDN1O60925 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PFDN1O60925 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PFDN1O60925 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.6■□□□□ 0.73
PFDN1O60925 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PFDN1O60925 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PFDN1O60925 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PFDN1O60925 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.59■□□□□ 0.73
PFDN1O60925 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PFDN1O60925 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PFDN1O60925 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PFDN1O60925 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
PFDN1O60925 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PFDN1O60925 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.59■□□□□ 0.73
PFDN1O60925 AC120498.9-201ENST00000339021 3867 ntBASIC19.58■□□□□ 0.73
PFDN1O60925 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PFDN1O60925 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PFDN1O60925 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PFDN1O60925 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PFDN1O60925 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PFDN1O60925 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.58■□□□□ 0.73
PFDN1O60925 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.58■□□□□ 0.73
PFDN1O60925 MIR6089-201ENST00000616698 64 ntBASIC19.58■□□□□ 0.72
PFDN1O60925 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
PFDN1O60925 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PFDN1O60925 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PFDN1O60925 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PFDN1O60925 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.58■□□□□ 0.72
PFDN1O60925 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PFDN1O60925 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PFDN1O60925 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
PFDN1O60925 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PFDN1O60925 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PFDN1O60925 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PFDN1O60925 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PFDN1O60925 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PFDN1O60925 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PFDN1O60925 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PFDN1O60925 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PFDN1O60925 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.57■□□□□ 0.72
PFDN1O60925 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PFDN1O60925 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PFDN1O60925 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.57■□□□□ 0.72
PFDN1O60925 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PFDN1O60925 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PFDN1O60925 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.57■□□□□ 0.72
PFDN1O60925 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PFDN1O60925 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
PFDN1O60925 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PFDN1O60925 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PFDN1O60925 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PFDN1O60925 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
PFDN1O60925 ZNRF2P1-201ENST00000441407 443 ntBASIC19.56■□□□□ 0.72
PFDN1O60925 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PFDN1O60925 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PFDN1O60925 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PFDN1O60925 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PFDN1O60925 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PFDN1O60925 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PFDN1O60925 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PFDN1O60925 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.56■□□□□ 0.72
PFDN1O60925 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PFDN1O60925 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PFDN1O60925 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.55■□□□□ 0.72
PFDN1O60925 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PFDN1O60925 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PFDN1O60925 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PFDN1O60925 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PFDN1O60925 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PFDN1O60925 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PFDN1O60925 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.55■□□□□ 0.72
PFDN1O60925 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PFDN1O60925 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.55■□□□□ 0.72
PFDN1O60925 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PFDN1O60925 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PFDN1O60925 AL158211.5-201ENST00000623583 2518 ntBASIC19.55■□□□□ 0.72
PFDN1O60925 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PFDN1O60925 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PFDN1O60925 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.54■□□□□ 0.72
PFDN1O60925 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PFDN1O60925 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PFDN1O60925 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.54■□□□□ 0.72
PFDN1O60925 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
PFDN1O60925 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
PFDN1O60925 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PFDN1O60925 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PFDN1O60925 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.54■□□□□ 0.72
PFDN1O60925 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PFDN1O60925 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PFDN1O60925 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PFDN1O60925 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms