Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PLOD3O60568 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PLOD3O60568 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PLOD3O60568 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PLOD3O60568 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PLOD3O60568 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PLOD3O60568 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PLOD3O60568 OR2I1P-207ENST00000453522 948 ntBASIC20.49■□□□□ 0.87
PLOD3O60568 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.49■□□□□ 0.87
PLOD3O60568 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.49■□□□□ 0.87
PLOD3O60568 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PLOD3O60568 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PLOD3O60568 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.49■□□□□ 0.87
PLOD3O60568 AC136469.2-201ENST00000623944 1028 ntBASIC20.49■□□□□ 0.87
PLOD3O60568 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PLOD3O60568 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PLOD3O60568 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PLOD3O60568 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.49■□□□□ 0.87
PLOD3O60568 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PLOD3O60568 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PLOD3O60568 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PLOD3O60568 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PLOD3O60568 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
PLOD3O60568 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.48■□□□□ 0.87
PLOD3O60568 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PLOD3O60568 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PLOD3O60568 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PLOD3O60568 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.48■□□□□ 0.87
PLOD3O60568 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.48■□□□□ 0.87
PLOD3O60568 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.48■□□□□ 0.87
PLOD3O60568 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.48■□□□□ 0.87
PLOD3O60568 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PLOD3O60568 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PLOD3O60568 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.48■□□□□ 0.87
PLOD3O60568 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.48■□□□□ 0.87
PLOD3O60568 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.48■□□□□ 0.87
PLOD3O60568 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PLOD3O60568 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PLOD3O60568 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PLOD3O60568 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
PLOD3O60568 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.47■□□□□ 0.87
PLOD3O60568 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
PLOD3O60568 AL117328.2-201ENST00000624617 1940 ntBASIC20.47■□□□□ 0.87
PLOD3O60568 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PLOD3O60568 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
PLOD3O60568 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PLOD3O60568 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PLOD3O60568 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PLOD3O60568 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PLOD3O60568 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PLOD3O60568 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.47■□□□□ 0.87
PLOD3O60568 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.47■□□□□ 0.87
PLOD3O60568 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PLOD3O60568 AL031602.1-201ENST00000633169 911 ntBASIC20.47■□□□□ 0.87
PLOD3O60568 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PLOD3O60568 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PLOD3O60568 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PLOD3O60568 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.47■□□□□ 0.87
PLOD3O60568 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.47■□□□□ 0.87
PLOD3O60568 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PLOD3O60568 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PLOD3O60568 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PLOD3O60568 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PLOD3O60568 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PLOD3O60568 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PLOD3O60568 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PLOD3O60568 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PLOD3O60568 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PLOD3O60568 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PLOD3O60568 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PLOD3O60568 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
PLOD3O60568 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.46■□□□□ 0.87
PLOD3O60568 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.46■□□□□ 0.87
PLOD3O60568 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.46■□□□□ 0.87
PLOD3O60568 CA15P2-201ENST00000611168 834 ntBASIC20.46■□□□□ 0.87
PLOD3O60568 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PLOD3O60568 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PLOD3O60568 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PLOD3O60568 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
PLOD3O60568 GUSBP5-202ENST00000510805 1989 ntBASIC20.46■□□□□ 0.87
PLOD3O60568 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PLOD3O60568 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PLOD3O60568 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PLOD3O60568 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PLOD3O60568 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PLOD3O60568 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PLOD3O60568 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PLOD3O60568 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PLOD3O60568 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PLOD3O60568 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PLOD3O60568 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PLOD3O60568 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PLOD3O60568 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PLOD3O60568 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PLOD3O60568 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PLOD3O60568 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.45■□□□□ 0.86
PLOD3O60568 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.45■□□□□ 0.86
PLOD3O60568 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PLOD3O60568 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PLOD3O60568 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms